Gene Information

Name : Sros_0525 (Sros_0525)
Accession : YP_003336292.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : AAA ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 529514 - 532096 bp
Length : 2583 bp
Strand : -
Note : KEGG: aba:acid345_4765 ATPase AAA-2

DNA sequence :
ATGGACTACAAGCTCACCCAGAAGAGCCAGGAAGCAGTCTCCTCCGCCATCAGGCGCGCCGCCGCCGAGGGCAACCCGGA
GGTCGCCCCGGCCCACCTGTTCACCTCGCTGCTCGGCCAGACCGGCGGCACCGCCGTGCCTCTGCTGGAGGCCGTCGGCG
CCGACTGGAAGCAGTTGCGCACCGAGGCCGAGCGGCAGCTCGCGGCGCTGCCGAAGGCGCAGGGCGCCACGGTCGGCGCC
CCGTCGAGCTCACGGCAGCTGCTCACCGTGCTGAACACCGCGGCCCAGCGGGCCCGGCAGCTTGAGGACGAATACGTCTC
GACCGAACACCTGCTGGTCGGCCTCGCCGCCGACGGCGGCCCGGTCGCCGAGCTGCTCAAGTCGCGCGGCGCCACCCCCA
ACACCCTGCTCGACGCGTTCGAGAAGGTGCGCGGGCATGCCCGGGTGACCAGCGAGACGCCCGAGGACACCTACCAGGCG
CTGGAGAAGTACGGCGTCGACCTGACCGAGCGGGCCAGGGCGGGCAAGCTCGACCCGGTGATCGGCCGCGACTCGGAGAT
CCGCAGGGTCATCCAGGTGCTCAGCCGCCGGACCAAGAACAACCCGGTGCTCATCGGGGAGCCCGGCGTCGGCAAGACCG
CCGTGGTGGAGGGTCTGGCCCAGCGGATCGTCGCCGGCGACGTGCCCTCCAGCCTGCGCAACAAGCGCCTGGTCGCGCTG
GACCTGGGCGCGATGGTCGCCGGGGCGAAATACCGCGGCGAGTTCGAGGAGCGCCTCAAGGCCGTGCTCAGCGAGATCAA
GGAGAGCGACGGCCAGGTCGTCACCTTCATCGACGAGCTGCACACCATGGTCGGCGCGGGCGCCGCCGAGGGCGCGATGG
ACGCGGGCAACATGCTCAAGCCCATGCTCGCCCGGGGCGAGCTGCGGATGATCGGTGCGACGACGCTGGACGAATACCGC
GAGCGCATCGAGAAGGACCCCGCCCTGGAGCGGCGCTTCCAGCAGGTCTACGTGGGCGAGCCCACGGTCGAGGACACCAT
CGCGATCCTGCGCGGCCTCAAGGGCCGCTACGAGGCGCACCACCAGGTCCAGATCGCCGACAGCGCGCTCGTGGCCGCCG
CCTCCCTCTCCGACCGCTACATCACCTCCCGGTTCCTGCCGGACAAGGCGATCGACCTCATCGACGAGGCCGCCTCCCGG
CTGCGCATGGAGATCGACTCCCGTCCCGTGGAGATCGACCAGCTCCAGCGGAACGTCGACCGGATGAAGATGGAGGAGCT
CGCGCTCGCCAAGGAGACCGACGAGGGCAGCATCCAGCGGCTGGAGCGGCTCCGCAAGGAGCTCGCCGACCGTCAGGAGG
AGCTCAACGGCCTGGTCGGGCGCTGGGAGCGGGAGAAGGCCGGGCTCAACCGGGTCGGCGACCTGAAGAAGAAGCTCGAC
GAGGTGCGCGGCGCCGCCGAGCGGGCACAGCGGGACGGTGACTTCGAGGCCGCCTCACGGCTGATGTACGCCGAGGTGCC
CAAGCTGGAGGCCGAGCTCGCCGAGGCCAGCGCGGCCGCCCAGCCCGATGACCCGATGGTCAAGGAGGAGGTCGGCCCGG
ACGACATCGCCCAGGTCATCTCCTCGTGGACCGGTATCCCCTCGGGGCGCCTGCTGGAGGGGGAGTCCGCCAAGCTGCTC
CGCATGGAGGAGGAGCTCGGCAGGCGGCTGATCGGCCAGAAGGAGGCCGTCCAGGCGGTCTCCGACGCCGTACGGCGGGC
ACGGGCGGGCATCTCCGACCCCGACCGGCCGACCGGCAGCTTCCTGTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAGC
TGGCCAAGTCGCTGGCCGACTTCCTGTTCGACGACGAGCGGGCGATGGTCCGCATCGACATGAGCGAGTACGGCGAGAAG
CACAGCGTGGCGCGTCTGGTGGGGGCGCCGCCCGGATACATCGGCTACGAGGAGGGCGGCCAGCTCACCGAGGCCGTGCG
GCGCAGGCCGTACACCGTGGTGCTGCTGGACGAGGTCGAGAAGGCCCACCCCGAGGTCTTCGACATCCTGCTCCAGGTGC
TCGACGACGGGCGGCTCACCGACGGGCAGGGCCGGACCGTCGACTTCCGCAACGTGATCCTGATCCTCACCTCCAACATC
GGCTCGCAGTTCCTCGTGGACCCGAAGCTGGACAAGGACGCCCAGCAGAAGGCCGTGATGGACGCGGTCAGAAACTCCTT
CAAGCCGGAGTTCCTCAACCGGCTCGACGACGTGATCCTGTTCGAGGCGCTCGGCGTGGAGGAGCTGTCCAGGATCGTGG
ACCTGCAGGTGACGCACCTGGCCCGGCGGCTGGCCGACCGGCGGCTCACGCTGACCGTGACCCCGGCGGCGCGCGACTGG
CTGGCGCTGACGGGCTACGACCCGATGTACGGCGCGCGGCCGCTCCGCCGCCTCGTCCAGTCGTCGATCGGCGACAAGCT
GGCCAAGGAGGTGCTGTCCGGCGAGGTCCAGGACGGCGACGAGGTCCTGGTGGACCTCGACAAGACGAGCGACACCCTGG
AGATCGGCCCCGTGAGGGCCTGA

Protein sequence :
MDYKLTQKSQEAVSSAIRRAAAEGNPEVAPAHLFTSLLGQTGGTAVPLLEAVGADWKQLRTEAERQLAALPKAQGATVGA
PSSSRQLLTVLNTAAQRARQLEDEYVSTEHLLVGLAADGGPVAELLKSRGATPNTLLDAFEKVRGHARVTSETPEDTYQA
LEKYGVDLTERARAGKLDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPSSLRNKRLVAL
DLGAMVAGAKYRGEFEERLKAVLSEIKESDGQVVTFIDELHTMVGAGAAEGAMDAGNMLKPMLARGELRMIGATTLDEYR
ERIEKDPALERRFQQVYVGEPTVEDTIAILRGLKGRYEAHHQVQIADSALVAAASLSDRYITSRFLPDKAIDLIDEAASR
LRMEIDSRPVEIDQLQRNVDRMKMEELALAKETDEGSIQRLERLRKELADRQEELNGLVGRWEREKAGLNRVGDLKKKLD
EVRGAAERAQRDGDFEAASRLMYAEVPKLEAELAEASAAAQPDDPMVKEEVGPDDIAQVISSWTGIPSGRLLEGESAKLL
RMEEELGRRLIGQKEAVQAVSDAVRRARAGISDPDRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYGEK
HSVARLVGAPPGYIGYEEGGQLTEAVRRRPYTVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTSNI
GSQFLVDPKLDKDAQQKAVMDAVRNSFKPEFLNRLDDVILFEALGVEELSRIVDLQVTHLARRLADRRLTLTVTPAARDW
LALTGYDPMYGARPLRRLVQSSIGDKLAKEVLSGEVQDGDEVLVDLDKTSDTLEIGPVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-98 44
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-93 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 8e-94 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_0525 YP_003336292.1 AAA ATPase VFG2076 Protein 2e-110 44
Sros_0525 YP_003336292.1 AAA ATPase VFG2084 Protein 2e-102 43