Gene Information

Name : Sros_5111 (Sros_5111)
Accession : YP_003340639.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5625727 - 5626515 bp
Length : 789 bp
Strand : +
Note : KEGG: dac:Daci_3149 ABC transporter

DNA sequence : 
GTGACGGAAGTACGCCTGCGCGCTCAGGACCTGGAATTGCGCTACGCCGACCGCGTGGTCTCGACGCGGCTCAACCTGGA
TGTGCCCGACGGCTCGTTCACCGCGATCGTAGGCGCCAACGCATGCGGGAAGTCGACCTTGCTGCGCGCGCTCGTCCGGC
TGCTGAAGCCGGCTGAAGGCCAGGTGCTGCTCGACGGCCGGGACGTCGGCTCGTACGCCGCCAAGGCGCTCGCGCGGTCC
CTGGGCTTCCTGCCTCAGGAACCTCTGGCGCCGGAGGACATCAAGGTCCGGCAGCTCGTCGGACGCGGCCGGTTCCCGCA
TCAGCCGCTCCTGGCGCTCTGGTCGGCGGAGGACGAGAGCGCGGTGGCTGAGGCCATGGTCACCGCGGGCGTCGAGAATC
TCGCGGACAGGGCTGTGAACGAGCTGTCGGGAGGGCAGCGGCAGCGGGTGTGGGTGGCCATGGTGCTCGCCCAGCGCACG
CCGTACCTGCTGCTCGACGAGCCGACGTCGTTCCTGGACATCGCGCACCAGTACCGGCTGCTGGCCCTGCTCGCCCGGCT
GCGCGAGCAGGGCCGTACCGTCGTGGCCGTCCTGCATGACATCAACCAAGCGTGCAGGTTCGCCGATCATCTGATCGCGA
TGAAGGACGGCCGGATCGTCGCCGAGGGCGCCGCCGCGGAGATCGTGGACGCCGCACTGGTCAAGGAAGTCTTCGACCTG
CCTGCCGTTGTGGCGCCCGACCCGGTGACCGGAACGCCGATGATCGTCCCCACCCTTGACATCCACTGA

Protein sequence : 
MTEVRLRAQDLELRYADRVVSTRLNLDVPDGSFTAIVGANACGKSTLLRALVRLLKPAEGQVLLDGRDVGSYAAKALARS
LGFLPQEPLAPEDIKVRQLVGRGRFPHQPLLALWSAEDESAVAEAMVTAGVENLADRAVNELSGGQRQRVWVAMVLAQRT
PYLLLDEPTSFLDIAHQYRLLALLARLREQGRTVVAVLHDINQACRFADHLIAMKDGRIVAEGAAAEIVDAALVKEVFDL
PAVVAPDPVTGTPMIVPTLDIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-55 54
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-55 54
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-55 54
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-55 54
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-47 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-52 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-51 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-51 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_5111 YP_003340639.1 ABC transporter BAC0164 Protein 3e-47 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_5111 YP_003340639.1 ABC transporter VFG0925 Protein 1e-63 55
Sros_5111 YP_003340639.1 ABC transporter VFG1042 Protein 3e-47 47