Gene Information

Name : Sros_5060 (Sros_5060)
Accession : YP_003340593.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5585192 - 5585986 bp
Length : 795 bp
Strand : +
Note : KEGG: pmy:Pmen_4566 ABC transporter

DNA sequence : 
GTGATCCCGATGGACAGACCCGCGGCTCTGCACGTCGAAGGCGTCGGCGTCGTCGTCGGCGGCCGGGCCCTGGTGCGGGA
GGTGTCGCTGGAGGTCGCGCCGGGTGAGATGGTCGCGCTCGTCGGACCCAACGGCGCCGGCAAGTCGACCCTGCTCCGTA
CCCTCTACCGGGCGCTGCGCCCCACGTCGGGGCAGGTGACGCTGGACGGAGAGGACGTCTGGCGGATGACCGGCAGGCGG
CTGGCCCGGCGGCTGGCCGCCGTCCTGCAGGAGGCGCCCGGCGAGTTCGAGCTGACCGTGTACGACGTGGTCGCCATGGG
CCGCACCCCCTACAAGCGGGCGTTCCAGGGCGACGATGCCGACGACCGGAGCATCGTCATGAGCGCCCTGGAGGAACTGG
ACGTCGCCGATCTCACCCAGGCCCCCTTCGACCGGCTGTCCGGCGGCGAGAAACAGCGCGTCCTCATCGCCCGCGCGCTG
GCCCAGCGAGCCGGGACGATGGTGCTGGACGAGCCGACCAACCACCTCGACCTGCGCCATCAGCTCGACGCGCTGCGGCT
GGTGCGGCGGCTCGGCGTGACCGCCGTCGTCGCGCTGCACGACCTCAACCTGGCGGCGGCGTTCTGCGACCGGATCTGCG
TCATGGCCGCCGGCCGCCTGGTCGCCGCGGGCCCGCCCGCCGAGGTGCTCACCGCGTCTTTGCTGGCCGAGGTCTATCGC
GTGGACGCCGAGGTGAACCCTCACCCCCGTACCGGCCTCCCCCAGATCAGCGTGCTGCCGGGCGGTGCCCGATGA

Protein sequence : 
MIPMDRPAALHVEGVGVVVGGRALVREVSLEVAPGEMVALVGPNGAGKSTLLRTLYRALRPTSGQVTLDGEDVWRMTGRR
LARRLAAVLQEAPGEFELTVYDVVAMGRTPYKRAFQGDDADDRSIVMSALEELDVADLTQAPFDRLSGGEKQRVLIARAL
AQRAGTMVLDEPTNHLDLRHQLDALRLVRRLGVTAVVALHDLNLAAAFCDRICVMAAGRLVAAGPPAEVLTASLLAEVYR
VDAEVNPHPRTGLPQISVLPGGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 6e-39 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-29 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-27 42
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-26 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-26 41
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-28 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_5060 YP_003340593.1 ABC transporter BAC0164 Protein 2e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_5060 YP_003340593.1 ABC transporter VFG1042 Protein 2e-29 42