|
Name : Sros_4705 (Sros_4705) Accession : YP_003340294.1 Strain : Streptosporangium roseum DSM 43021 Genome accession: NC_013595 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 5230874 - 5231764 bp Length : 891 bp Strand : + Note : KEGG: aav:Aave_4118 integrase catalytic subunit DNA sequence : ATGAAGTTCCGGTTGATTCATGCGGAGAAGGACCACCACAAGGTCTCCCTGCTGGCTCGGGTGCTGGGTGTGTCGCGCCA GGGCTACTACGCCTGGGCGGCCCGGCAGCGGCGCGGCCCGTCGACTCGAGCCCGTCGCGACGCCGAGCTGACCGAGCGGA TCCGTCGGCATCACCAAGCGTCTGATGAGATCTACGGGGCGCCACGTATTCACGCCGACCTGCGCGAACTGGATGGGGTC CGGGTGGGCCGCAAACGAGTGGCCCGGCTGATGCGCGTGGCCGGGCTGGCCGGGGTGAGCAGGCGTAAGGGCGCCCGCAC CACTGTCACCGATCCGCGCGCCAGATCTGCATCCGACTTGGTCGGGCGCGACTTCTGTGCCGAGGAGCCAAACCGGATCT GGACCGCTGACATCACGTACGTGCCGACCTGGCAGGGCTTCGTCTATCTGGCGGTGGTGCTGGATGTCTTCTCCCGCCGG ATCGTCGGCTGGGCGATGGCCGAGCACATGCGCACCGAGTTGGTGACCGATGCGCTGGCGATGGCGCTGCACCAGCGCCA CCCCGAGGCCGGGGTGATTCACCACAGCGATAAGGGGGGTCAATACACCTCGTTTGCCTTCGGTCAGCGCTGTGAGCAGG CAGGCGTCCGCCCGTCGACGGGCCGGACCGGAACGTGCTTCGACAATGCGATCACTGAGAGCTTCTTCGCCTCGCTGGAG TGCGAGCTGATTGACCGGCGCACCTTCCGCACCAGGTCAGAAGCCGAACGGGCCCTGTTCAGCTACATCGAGGGCTTCTA CAACCCGCGCCGCCGTCACTCCGCCAACGGCCAGCTCAGCCCCGCCGAAATACGAACGCCGACACGCGCTCAAGAACGCC CAAGACCTTGA Protein sequence : MKFRLIHAEKDHHKVSLLARVLGVSRQGYYAWAARQRRGPSTRARRDAELTERIRRHHQASDEIYGAPRIHADLRELDGV RVGRKRVARLMRVAGLAGVSRRKGARTTVTDPRARSASDLVGRDFCAEEPNRIWTADITYVPTWQGFVYLAVVLDVFSRR IVGWAMAEHMRTELVTDALAMALHQRHPEAGVIHHSDKGGQYTSFAFGQRCEQAGVRPSTGRTGTCFDNAITESFFASLE CELIDRRTFRTRSEAERALFSYIEGFYNPRRRHSANGQLSPAEIRTPTRAQERPRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 5e-40 | 46 |
| c5167 | NP_757015.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-34 | 45 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 1e-52 | 44 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-52 | 44 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-52 | 44 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 6e-42 | 43 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 5e-42 | 43 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-41 | 43 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 5e-42 | 43 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-41 | 43 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 5e-42 | 43 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 1e-41 | 43 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 4e-42 | 43 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 2e-43 | 43 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 1e-42 | 43 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 3e-44 | 42 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 3e-44 | 42 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 3e-44 | 42 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 3e-44 | 42 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 2e-44 | 42 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 9e-45 | 42 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 2e-44 | 42 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 9e-45 | 42 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 8e-44 | 42 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 3e-42 | 42 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-41 | 42 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 3e-42 | 42 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 4e-42 | 42 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 4e-42 | 42 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 4e-42 | 42 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 2e-35 | 42 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 2e-35 | 42 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sros_4705 | YP_003340294.1 | integrase catalytic subunit | VFG1706 | Protein | 1e-44 | 42 |
| Sros_4705 | YP_003340294.1 | integrase catalytic subunit | VFG1602 | Protein | 9e-39 | 41 |
