Gene Information

Name : Sros_4674 (Sros_4674)
Accession : YP_003340270.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 5198820 - 5199533 bp
Length : 714 bp
Strand : +
Note : KEGG: cak:Caul_1642 ABC transporter

DNA sequence :
GTGATCGAATTCCATTGCGTCAGCAAGACATACAAAGGGGTGAAAGCCCTCGACGAGGTGTCCTTCACCGTCGAGGCAGG
CAGCGTCACCGGGTTCCTCGGGCCCAACGGCGCGGGAAAATCGACGGCTCTGCGTATCCTGACCGGGCTCTCGCGGCCGA
CATCGGGGTCGGCCACCGTGTTCGGGCGGCCGTACGCCGAACTCGCCTGTCCCGGCCGCCGGGTCGGCACGCTGCTCGAC
GCCAGCGCCCTGCATCCGGGGCGCAGTGGGCGGGAGGTCCTGACGCTGGGGGCGATGATATTGGGCCTGCCCCGCTCGCG
CGTCGAGGAGAGCCTGGAGCTGGTCGGGCTGACCGGCAAGGAGGGCAGGCGGACCGTCGGCGGCTATTCGCTGGGCATGC
GGCAGCGGCTCGGCATCGCCCACGCGTTGCTCGGCCGGCCCGAGGCGCTCGTACTGGACGAGCCCGCCAACGGCCTCGAC
CCACAGGGCATCCAGTGGATGCGCGGGCTGCTGCGCAGCCTGGCCGACTCCGGGTGCGCGGTGCTGCTCAGCTCACACCT
GCTGCACGAGGTGGAGCAGGTCGCCGACCAGATCGTGATGATCGGACGCGGCCGCCTGCTCGCCCGGGGCACCGTCGCCG
AGCTCGCCCGCGGTGGCGGCCTGGAGCAGACCTTCCTCGAACTGACCGCGCGAGCCGACAGGAGCGCCGCATGA

Protein sequence :
MIEFHCVSKTYKGVKALDEVSFTVEAGSVTGFLGPNGAGKSTALRILTGLSRPTSGSATVFGRPYAELACPGRRVGTLLD
ASALHPGRSGREVLTLGAMILGLPRSRVEESLELVGLTGKEGRRTVGGYSLGMRQRLGIAHALLGRPEALVLDEPANGLD
PQGIQWMRGLLRSLADSGCAVLLSSHLLHEVEQVADQIVMIGRGRLLARGTVAELARGGGLEQTFLELTARADRSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 5e-43 47
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 5e-43 47
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 2e-36 45
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-43 44
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 5e-30 42
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 2e-37 41
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 7e-30 41
cdd4 CAA63569.1 - Not tested PaLoc Protein 9e-37 41