Gene Information

Name : Sros_3467 (Sros_3467)
Accession : YP_003339146.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3813185 - 3814210 bp
Length : 1026 bp
Strand : -
Note : KEGG: oan:Oant_2826 transporter permease

DNA sequence :
ATGACTCGGAGCGGAGCGCTCCGGCCGGCCTTTCTCGTGGCGCTGCTCGGCGCCCTCCTCGTCGCGCTCTGCCTGCTGTC
GCTCGCGCTCGGCGCCCTGAGCATCCCCCTTGACCAGGTCGTACGGACGCTGCTCGGCCACCCGGGCAGCACTCTCGTCG
AGAACGTCATCTGGTCCGTGCGCGTGCCGCGCACCGCGCTGGGCCTCACGGCCGGCGCGGCTCTCGGACTGTCCGGCGCG
CTCATGCAGGCGCTGACCCGCAACCCGCTCGCCGACCCCGGCATACTGGGCGTCAGCGCCGGCGCCGCCTTCGCGATCGT
GCTGTCGGTCGCGGTGCTCGGGCTGGGGACGCTGCTCGGCTACATCTGGTTCGCCTTCGCGGGCGCGCTCGTCGCGAGTG
TCCTGGTCTTCATGCTGGGCAAGCTGGGGCGGTCCGGTCTGACGCCGGTCAAGCTCGCGCTCGCCGGAGTCGCCGTGACC
TCGCTGCTGTCCTCACTCACCAGCGCCGTCGTCCTGACCAACCCGGAGGCGCTCAACCGCTACCGTTTCTGGTCGGCCGG
CTCGCTCGCCGACCAGAACGGCGATGTGGTGCTCCATCTCCTGCCGTTCGTCATCGCCGGCACCGTACTGGCGCTGGCCT
GCGCGCCCACGCTCAACAGCATGGCCCTCGGTGACGACGTGGCCGCCTCGCTGGGGCGGCGGCTGGGTCTCGTACGGCTG
CAGGGCGTGATCGCGATCACGCTGCTGACCGGCGGGGCGGTGGCGGTCATCGGGCCGGTCGTCTTCCTCGGGCTGGTCGT
CCCGCACATCGCCCGGGTCCTGGCCCAGTACGCCGGCCTGGGCCCCGATCATCGCTGGCTGCTGCCGCTGTCGGCGGTGC
TCGCCCCCTGCCTGCTGCTCGTCGCGGACATCATCGGACGGGTCGTCGGCCGGCCGGTCGAGATCCAGGCCGGGATCCTG
GTCGCCTTCATCGGCGGCCCGTTCTTCATCACCATGGTCCGCCGCCGTCGGCTCGCGGAGGTGTGA

Protein sequence :
MTRSGALRPAFLVALLGALLVALCLLSLALGALSIPLDQVVRTLLGHPGSTLVENVIWSVRVPRTALGLTAGAALGLSGA
LMQALTRNPLADPGILGVSAGAAFAIVLSVAVLGLGTLLGYIWFAFAGALVASVLVFMLGKLGRSGLTPVKLALAGVAVT
SLLSSLTSAVVLTNPEALNRYRFWSAGSLADQNGDVVLHLLPFVIAGTVLALACAPTLNSMALGDDVAASLGRRLGLVRL
QGVIAITLLTGGAVAVIGPVVFLGLVVPHIARVLAQYAGLGPDHRWLLPLSAVLAPCLLLVADIIGRVVGRPVEIQAGIL
VAFIGGPFFITMVRRRRLAEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-21 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-21 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-21 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_3467 YP_003339146.1 transporter permease VFG0926 Protein 1e-27 50