Gene Information

Name : Sros_2767 (Sros_2767)
Accession : YP_003338468.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 3006794 - 3008440 bp
Length : 1647 bp
Strand : -
Note : KEGG: hch:HCH_04523 urease subunit alpha

DNA sequence :
ATGAGCAGTGTCTCCCGCGACACCTACAACAAGCTTTACGGCCCGACGGCCGGGGACCGGGTCCGGCTCGGCGACACCTG
CCTGTGGATCGAGATCGAGCGTGACGACGTCCCGCACGGCGACGAGCTGCTCGGCGGCTGCGGCAAGACACTGCGCGACG
GCCTGCTGGCCGCCCCCCGCGGCGACCGGGACTCGGCGCTGGACGTGGTGGTGGCCGGGGTCGTGCTGATGGACCCGGTG
CTGGGCGTGCGCAAGACCCACATCGGCGTCAAGGACGGCCGCATCGTCCCCTTCGAGGGCGCCGTCATCGACTCCCACAC
CGCGATAGTGCCCGGCGAGGGGCTGATCGCCACCCCCGGCGTCGTCGACTCGCACGTGCACCTGTCCTCACCCGAGATCG
CCCCGGCGGCGCTGGCCTCCGGCGTCACGACGGTCGTGGGCATGGGCCTGGGCGGCGTCTGGGACGTGGGCTGCAACCCG
GCGCACAACCTGCACACGCTGATGAGCGCCTGGCGCGGCACCCCGCTGAACGTCGCGTTCCTGGCCCGGGGATCCTCCAG
CTCCTCGACGCTGCTGGAGGAGGCGGTGCTGGCCGGGGCCGGCGGTTTCAAGATCCACGAGGACTTCGGCGCCACCCCGC
GCATCGTGGACACCTGCCTCGGCGTCGCCGAGCAGGCGGACCTGCCGGTGGCGTTGCACTCGGACTCGATGAACGAGTCC
GGCTACCTCGCCGACACCGTCGGCGCCACGCGGGGCCGTACCGTGCACGCCTACCACGTCGAAGGCGGCGGCGGCCATCC
CGACCTGCTGGAGATCCTCGGCGAGCCGAACATCCTCGCCTCCTCCACCACGCCGACCATCCCCTACACCACCAACACGG
TCGGCGAGCTGTTCCCGATGACGATGACCGTGCACCGGCAGAACCACCACATCGACAGCGACGTGGAGGTGACGAGGACC
CGGCTGCGCGTCCACGGCATCGCCGCCGAGAACGTGCTGCACGACCTCGGCGCCATCAGCATCGTCAACTCTGACTCCAT
GGGCATGGGCCGGGTCGCCGAGACCGTCCGCCGCACCTGGCAGCTGGCCCACCTGCAGGCCCTGCGCGCGGGGACCCCCG
GCGTCGACAACGCCCGGGTGCTGCGGTACCTGGCCAAGCTGACCCTGAACCCGGCCATCGCCCACGGCCTCGCCCACGAG
GTGGGCACCCTGCAGCCGGGCCGTCTGGCCGACATCGTGCTGTGGCACCCCGCCTGGTTCGGCACCAAGCCCGAGCTCGT
GCTCAAGGGCGGCTTCGTCGCCCACGGCGTGTCCGGCAGCGGCTCGGGCTCCACCCGGCTCACCCAGCCCCGCACCTACC
GCCCCTACTTCGGCGGGCTCGGCGACGCGCCGAGCCGGCTGTCGCGGGTCTTCGTCGCCCACGAGGCGCTCGACTCCGCC
GAATCCCGTGACGCGCTGCCCACCGGCCTGCGCTACGCGGCCATCCGGCACTCACGCGGCCTGACCAGGGCCGACATGTG
CCGCAACACCGCGACCCCGCAGGTCGAGGTGCCCCGCGATCCCGGTCCCGTCCTGGTGGACGGGACCGAGGTCGGCGTGG
CCCCCGCGACCGAGGTGCCGCTCGCCCGTCTCCACCACTTCGCCTAA

Protein sequence :
MSSVSRDTYNKLYGPTAGDRVRLGDTCLWIEIERDDVPHGDELLGGCGKTLRDGLLAAPRGDRDSALDVVVAGVVLMDPV
LGVRKTHIGVKDGRIVPFEGAVIDSHTAIVPGEGLIATPGVVDSHVHLSSPEIAPAALASGVTTVVGMGLGGVWDVGCNP
AHNLHTLMSAWRGTPLNVAFLARGSSSSSTLLEEAVLAGAGGFKIHEDFGATPRIVDTCLGVAEQADLPVALHSDSMNES
GYLADTVGATRGRTVHAYHVEGGGGHPDLLEILGEPNILASSTTPTIPYTTNTVGELFPMTMTVHRQNHHIDSDVEVTRT
RLRVHGIAAENVLHDLGAISIVNSDSMGMGRVAETVRRTWQLAHLQALRAGTPGVDNARVLRYLAKLTLNPAIAHGLAHE
VGTLQPGRLADIVLWHPAWFGTKPELVLKGGFVAHGVSGSGSGSTRLTQPRTYRPYFGGLGDAPSRLSRVFVAHEALDSA
ESRDALPTGLRYAAIRHSRGLTRADMCRNTATPQVEVPRDPGPVLVDGTEVGVAPATEVPLARLHHFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 1e-79 42
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 1e-79 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_2767 YP_003338468.1 urease VFG0270 Protein 8e-83 41