Gene Information

Name : Sros_2524 (Sros_2524)
Accession : YP_003338243.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2755910 - 2756815 bp
Length : 906 bp
Strand : +
Note : KEGG: rsk:RSKD131_3579 ABC transporter

DNA sequence : 
GTGAGCGGGCCGGGAGGCGTGCGCGGCGCGCCCGCCCACACGGGCCCCGAGCCGCGGGACGAGAGGGCCGCGAAACGAGA
GCCCGTGGGACGAGAGCCCATGGGACGAGCGGGCGCGGGACGGGGGGATCGGGTGAGCCACGTCAGGGTGAGAGACCTCG
CCGTCGTCCTGGAGACGCGGACCGTGCTGTCCGGCGTCGGGTTCGAGGTGCGGGGCGGTGACTGGCTGGCCGTCATCGGG
GCCAACGGCGCGGGCAAGTCCACGCTGCTCAGGGCGCTCGCCGGGGTGCTGCCCTGCTCCGGCGAGGTGCTCGTCGACGA
CACGCCCGTCCGCAGGCTCAGGGCCAGGGACCGGGCCCGGCTGCTCGCCTACGCCCCGCAGGCCCCGGCGCTCCCGGTCG
ACATGACCGTGTTCGACTACGCCCTGCTGGGCCGCACGCCGTACATCCCCTATCTGGGCCGGGAGAGCCGCCGCGACCGC
GAGGTGACGGCGTCGGTGCTGGAGCGACTCGACCTGTCGTCCTTCGCCTCCCGCACGCTGGGCCACCTGTCCGGGGGCGA
GCGCCAGCGCGTCGTGCTCGCCAGGGCGCTGGTCCAGCAGGCTCCCGTGCTCCTGCTCGACGAGCCCACCACCGCCCTTG
ACCTGGGGCACCAGCAGCAGGTCCTGGAACTCCTCGACCGCCTCCGCCTGGCCGACGGGCTGACCGTGGTCACGACCCTG
CACGACCTGAGCCTCGCCGGCCAGTACGCCGACTCGATGATGCTGATCGCCGGGGGCCGGGTGGCGGCCTCCGGCACCCC
GGCCGAGGTGCTGACGGAGAGACTGATCGGCGAGCACTTCGACGCCCGCGTCCGTGTCGGGACCGGCGCCGGAGGCAGGC
CCCAGGTTCATCTGGAGCGCCCTTGA

Protein sequence : 
MSGPGGVRGAPAHTGPEPRDERAAKREPVGREPMGRAGAGRGDRVSHVRVRDLAVVLETRTVLSGVGFEVRGGDWLAVIG
ANGAGKSTLLRALAGVLPCSGEVLVDDTPVRRLRARDRARLLAYAPQAPALPVDMTVFDYALLGRTPYIPYLGRESRRDR
EVTASVLERLDLSSFASRTLGHLSGGERQRVVLARALVQQAPVLLLDEPTTALDLGHQQQVLELLDRLRLADGLTVVTTL
HDLSLAGQYADSMMLIAGGRVAASGTPAEVLTERLIGEHFDARVRVGTGAGGRPQVHLERP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-30 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-30 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-25 41
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-30 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_2524 YP_003338243.1 ABC transporter BAC0164 Protein 6e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_2524 YP_003338243.1 ABC transporter VFG1042 Protein 5e-25 41