Gene Information

Name : Sros_1745 (Sros_1745)
Accession : YP_003337479.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Resistance
Product : efflux ABC transporter lipoprotein translocase (LPT) family, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1861107 - 1861877 bp
Length : 771 bp
Strand : -
Note : KEGG: aca:ACP_2560 efflux ABC transporter lipoprotein translocase (LPT) family, ATP-binding protein

DNA sequence : 
GTGACCATCACCGGAGAGGTCGGCGCGTGGAACGCGCGGGGGGACGCGGCGGCCGCCGTGGTAGCCAGGGGCCTGACGAA
GGTGTACGGCCAGGGGGATGCGGCCGTGCACGCCCTCCGGGGGGTGGACATCTCTTTCGCGACGGGCGCCTTCACCGCGA
TCATGGGTCCTTCCGGGTCGGGTAAGTCCACGCTGATGCACTGTCTGGCGGGGCTGGACACGGTCAGCGGGGGGCAGGTC
CACATCGGTGACGTGGAGCTCACCGGGCTCAACGACAAGCAGCTCACCCTGCTGCGTCGTGAGCGGATCGGTTTCATCTT
CCAGGCGTTCAACCTGCTGCCGACGTTGACCGCGGAGCAGAACATCCGGCTGCCGCTGGAGATCGCGGGGCGTCAGGCCG
ATCGGGATCTGTTCGATCGGGTCGTGGAGACGGTGGGTCTGCGTGACCGGCTGGGTCACAAGCCGGCTGAGCTGTCGGGC
GGGCAGCAGCAGCGGGTGGCGGTGGCCCGTGCTCTGATCAGCAAGCCGCAGGTGATCTTCGCCGACGAGCCGACCGGCAA
TCTGGACTCGCGTAGCGGTGCCGAGGTGCTGTCGTTCCTGCGCACGTCGGTGCATGAACTGGGTCAGACGATCGTGATGG
TCACCCATGACCCGGTCGCGGCCTCCTATGCCGATCGGGTGGTCTTTCTCCGTGACGGTCTGCTGGTCAGCGAGCTGGTC
AGGCCGACGCCGCAGACCGTGCTCGACACGCTGATGAAGCTGGAGGCCTGA

Protein sequence : 
MTITGEVGAWNARGDAAAAVVARGLTKVYGQGDAAVHALRGVDISFATGAFTAIMGPSGSGKSTLMHCLAGLDTVSGGQV
HIGDVELTGLNDKQLTLLRRERIGFIFQAFNLLPTLTAEQNIRLPLEIAGRQADRDLFDRVVETVGLRDRLGHKPAELSG
GQQQRVAVARALISKPQVIFADEPTGNLDSRSGAEVLSFLRTSVHELGQTIVMVTHDPVAASYADRVVFLRDGLLVSELV
RPTPQTVLDTLMKLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-45 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-45 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-45 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-40 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_1745 YP_003337479.1 efflux ABC transporter lipoprotein translocase (LPT) family, ATP-binding protein CP001581.1.gene598.p Protein 1e-47 48
Sros_1745 YP_003337479.1 efflux ABC transporter lipoprotein translocase (LPT) family, ATP-binding protein CP001581.1.gene798.p Protein 1e-44 46
Sros_1745 YP_003337479.1 efflux ABC transporter lipoprotein translocase (LPT) family, ATP-binding protein NC_008702.1.4606598. Protein 2e-38 46
Sros_1745 YP_003337479.1 efflux ABC transporter lipoprotein translocase (LPT) family, ATP-binding protein NC_012469.1.7686878. Protein 1e-44 46