Gene Information

Name : Sros_1628 (Sros_1628)
Accession : YP_003337362.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1735101 - 1735853 bp
Length : 753 bp
Strand : +
Note : KEGG: gur:Gura_0894 ABC transporter

DNA sequence : 
GTGAGCCCACCCCCACCCCCCATCGTCAGCACGGTCAACCTCGTGAAGATCTACCAGAACGGCGGCGTCCCCGTGCCCGC
CGTCCGGGGGGTGGACCTTCAGGTCGAGGCGGGGCAGTTCGTCGCGGTCATGGGGCCGTCAGGGTCGGGCAAGTCCACCC
TGGTGCACATGATCGGGGGCCTGGACGCCCGGACCAGCGGCGAGATCTGGCTGGACGGCAGGCGGGCCGACACGCTGAGC
GAGAGCGCCTGGGCGCTGCTGCGCCGGCAGAAGATCGGCTTCGTCTTCCAGTTCTTCAACCTGGTCGCCAACATGACCGT
GGCCGACAACGTCGAGCTGCCCGCGCTGCTGGCCGGGTCCTCCCCGCGCGAGGCCCGCGAGCGGCGCGAGTATCTCCTCG
GGGAGCTCGGGCTGGCCGACCGCGCCGACTCCGCCCCCTCCCAGCTCGCGGGCGGCGAGCAGCAGCGGGTCGCCCTGGCC
CGCGCGCTGGCCAACAGGCCGAGCCTGCTGCTCGCCGACGAGCCCACCGGCAACCTCGACAGCCGCAACACCCGTGACGT
GCTCCGCCTTCTCAGCGAGGTCCACCGTGACGGCCAGACCATCATCATGGTCACCCATGACGCCCGGGTGGCCAGCCTGG
CCGACCGCGTGGTCTCCCTGCTCGACGGCGAGATCGTCGACGACGGGACCGTCGGCCCGGCCCGCCGGCGGCCCAGGGCC
ACCGCGGGCGACGTCGTCGAGCTGAGGGGGTAG

Protein sequence : 
MSPPPPPIVSTVNLVKIYQNGGVPVPAVRGVDLQVEAGQFVAVMGPSGSGKSTLVHMIGGLDARTSGEIWLDGRRADTLS
ESAWALLRRQKIGFVFQFFNLVANMTVADNVELPALLAGSSPREARERREYLLGELGLADRADSAPSQLAGGEQQRVALA
RALANRPSLLLADEPTGNLDSRNTRDVLRLLSEVHRDGQTIIMVTHDARVASLADRVVSLLDGEIVDDGTVGPARRRPRA
TAGDVVELRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_1628 YP_003337362.1 ABC transporter NC_008702.1.4606598. Protein 8e-36 48
Sros_1628 YP_003337362.1 ABC transporter CP001581.1.gene798.p Protein 2e-40 46
Sros_1628 YP_003337362.1 ABC transporter NC_012469.1.7686878. Protein 1e-43 45
Sros_1628 YP_003337362.1 ABC transporter CP001581.1.gene598.p Protein 7e-38 43
Sros_1628 YP_003337362.1 ABC transporter NC_012469.1.7685735. Protein 4e-40 43