|
Name : Sros_0142 (Sros_0142) Accession : YP_003335939.1 Strain : Streptosporangium roseum DSM 43021 Genome accession: NC_013595 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 143750 - 145012 bp Length : 1263 bp Strand : + Note : KEGG: bsu:BSU00130 seryl-tRNA synthetase DNA sequence : GTGATTGACCTGCGTACCCTTCGTGAGGATCCCGACCGGCTACGGGCGTCGCAGCGTGCCCGCGGTGAGGACGACTCCGT CGTCGAAACGCTGCTCGACCTCGACAGCCGCCGGCGCGGCGCGCTGAGCCGGTTCGAGACGCTGCGCGCCGAGCAGAAGA GCATCGGAAAGACGGTCTCCCGTGCCTCCGGGGACGAGAAGGCCGCCCTCCTCGACCGGGCCAAGGATCTCGCGGCGCAG GTCAAGTCGGCCGAGAGCGAGGCCGAGAAGCTCGCCGGGGAGCTCGACAACCTGCTCTACACGGTGCCCAACCTCGTGGA GGAGGGGGCTCCGGCCGGCGGCGAGGACGACTTCGTGCTGATCGAGGAGGTCGGCGAGAAGCCGTCCTTCGACTTCGAGC CCAAGGATCACCTGGAGCTCGGCGAGCTGCTCGGCGCGATCGACATGGAGCGCGGCGCGAAGGTCTCCGGCTCGCGGTTC TTCTTCCTCAGGGGCGTCGGCGCGCGGCTCCAGCTCGGCCTGCTCAACATGGCCATGCAGCAGGCGATCGAGGCGGGCTT CATCCCGATGATCCCCCCGGTGCTGGTCAAGCCCGAGTCGATGAAGGGCACCGGCTTCCTCGGCGAGCACGCCAGCGAGG TCTACCACCTGCCCGAGGACGACCTGTTCCTGGTCGGGACGAGCGAGGTGCCGATGGCGGCCTACCACGCCGACGAGATC CTCGACGGCGGCTCGCTGCCGTACCGCTACGCCGGATGGTCCACCTGCTTCCGCCGCGAGGCCGGCTCGTACGGCAAGGA CACCCGGGGCATCATCCGGGTCCACCAGTTCGACAAGGTGGAGATGTTCTCCTACACCCGCCCCGAGGACGCGCACGAGG AGCACCTGCGCCTGCTCGACTGGGAGAAGGAGATGCTCGCCAAGGTCGAGCTGCCCTACCGGGTGATCGACATCGCGGGC GGCGACCTGGGCGTCTCGGCGGCCCGCAAGTTCGACTGCGAGGCGTGGCTGCCCACCCAGGGCCAGTACCGCGAGGTCAC CTCGACCTCCAACTGCACCGGCTTCCAGGCCCGCCGCCTCGCCGTGCGCTATCGCGACAAGGACGGCAAGCCCCAGCACG TGGCCACGCTGAACGGCACCCTGGCCACCACCCGCTGGATCGCCGCCATCCTGGAGAACCACCAGCAGGCCGACGGCTCC GTCGTGGTCCCCAAGGCCCTGCGCCCCTACGTCGGCCTCGACGTCCTCGAACCCGTCAAGTAA Protein sequence : MIDLRTLREDPDRLRASQRARGEDDSVVETLLDLDSRRRGALSRFETLRAEQKSIGKTVSRASGDEKAALLDRAKDLAAQ VKSAESEAEKLAGELDNLLYTVPNLVEEGAPAGGEDDFVLIEEVGEKPSFDFEPKDHLELGELLGAIDMERGAKVSGSRF FFLRGVGARLQLGLLNMAMQQAIEAGFIPMIPPVLVKPESMKGTGFLGEHASEVYHLPEDDLFLVGTSEVPMAAYHADEI LDGGSLPYRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFSYTRPEDAHEEHLRLLDWEKEMLAKVELPYRVIDIAG GDLGVSAARKFDCEAWLPTQGQYREVTSTSNCTGFQARRLAVRYRDKDGKPQHVATLNGTLATTRWIAAILENHQQADGS VVVPKALRPYVGLDVLEPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-74 | 41 |
