Gene Information

Name : Sros_1333 (Sros_1333)
Accession : YP_003337071.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1379792 - 1380460 bp
Length : 669 bp
Strand : +
Note : KEGG: ank:AnaeK_0439 two component transcriptional regulator, winged helix family

DNA sequence :
ATGACCTGTGTACTTCTCGCCGAGGATGACACCTCGATCTCCGAGCCGCTGGCGCGTGCACTGCGCCGCGAAGGCTACCA
AGTTGAGGTGAGCCCCGACGGCCCGCAGGCCCTGGAGCGGGCTCTGTCGGGTGGCATCGACTTGATAGTTCTTGACCTGG
GCCTACCCGAGATGGACGGTCTCGAGGTGGCCCGGCGTATCCGCGCGGAAGGGCACGGCACGCCCGTGCTCATCCTCACA
GCCCGTGTCGACGAGGTGGACACCGTGGTGGGCCTCGACGCCGGGGCCGACGACTACGTCACCAAACCGTTCCGCCTGGC
GGAGCTCCTGGCCCGGGTCCGCGCCCTCCTGCGGCGCGGCACGTCCGAGACGCCCGTGGTGCAGGGCGTGCGCATCGACG
CCGACTCCCGTCGCGCGTGGATGGGCGACAAGGAGCTGCACCTGACGACCAAGGAGTTCGACCTGCTGCGCGTCCTCGTC
CGCGACGCCGGCAAGGTGGTCACCCGCGAGCAGATCATGCGCGAGGTGTGGGACACCAACTGGTGGGGCTCCACCAAGAC
TCTCGACATGCACATCTCGTGGCTGCGCCGCAAGCTGGGTGACGACGCCGCCAAGCCCCGTTACATCACGACGGTCCGAG
GGGTCGGCTTCCGGTTCGAACGCGAGTAG

Protein sequence :
MTCVLLAEDDTSISEPLARALRREGYQVEVSPDGPQALERALSGGIDLIVLDLGLPEMDGLEVARRIRAEGHGTPVLILT
ARVDEVDTVVGLDAGADDYVTKPFRLAELLARVRALLRRGTSETPVVQGVRIDADSRRAWMGDKELHLTTKEFDLLRVLV
RDAGKVVTREQIMREVWDTNWWGSTKTLDMHISWLRRKLGDDAAKPRYITTVRGVGFRFERE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-19 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_1333 YP_003337071.1 response regulator receiver protein NC_002952.2859858.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein AE015929.1.gene1106. Protein 8e-22 43
Sros_1333 YP_003337071.1 response regulator receiver protein NC_007622.3794948.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein NC_003923.1003417.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein NC_013450.8614146.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein NC_002951.3238224.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein NC_007793.3914065.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein NC_002758.1121390.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein NC_010079.5776364.p0 Protein 4e-26 43
Sros_1333 YP_003337071.1 response regulator receiver protein BAC0083 Protein 3e-24 43
Sros_1333 YP_003337071.1 response regulator receiver protein BAC0197 Protein 6e-19 43
Sros_1333 YP_003337071.1 response regulator receiver protein BAC0125 Protein 2e-22 41
Sros_1333 YP_003337071.1 response regulator receiver protein BAC0487 Protein 2e-15 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_002952.2859905.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_002745.1124361.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_009782.5559369.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_002951.3237708.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_002758.1121668.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_009641.5332272.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_013450.8614421.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_007793.3914279.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_007622.3794472.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein NC_003923.1003749.p0 Protein 1e-31 41
Sros_1333 YP_003337071.1 response regulator receiver protein BAC0638 Protein 9e-17 41
Sros_1333 YP_003337071.1 response regulator receiver protein AE000516.2.gene3505. Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_1333 YP_003337071.1 response regulator receiver protein VFG0473 Protein 3e-18 44
Sros_1333 YP_003337071.1 response regulator receiver protein VFG0596 Protein 7e-20 43
Sros_1333 YP_003337071.1 response regulator receiver protein VFG1390 Protein 2e-29 43
Sros_1333 YP_003337071.1 response regulator receiver protein VFG1389 Protein 1e-26 42