Gene Information

Name : Sros_0102 (Sros_0102)
Accession : YP_003335901.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 103799 - 104467 bp
Length : 669 bp
Strand : -
Note : KEGG: bam:Bamb_5988 two component heavy metal response transcriptional regulator

DNA sequence : 
ATGCGCGTGCTGCTGGTTGAGGACGAGAAGCGCCTGGCCGATCTGCTGAAGGGCGGGCTGGCCGGCGAGGGGTTCGCCGT
GGACGTCGCCCACGACGGGCGCGACGGCCTGTGGATGGCGAGCGAGAACGTCTACGACGTGATCGTGCTCGACGTCATGC
TGCCCCGGATGAACGGCTACACCGTCTGCGCCAGGCTCCGCGACGCGGAGAACTGGACGCCGATACTGATGCTCACCGCC
AAGGACGGGGTGCACGACGAGGCCGAGGCCCTGGACACCGGCGCCGACGACTTCCTCTCCAAGCCGTTCTCCTACGTGGT
GCTGCTGGCCCGGCTGCGCGCGCTGATCCGCCGGGGCGGCCGGGCCAGGCCGGTCTCCATCACGGTGGGCGACCTGACCG
TCGACCCAGCCGGGCTCCGCTGCCGCCGGGGCGAGGTGGAGATCGCCCTCACCCCGAAGGAGTTCGCGGTCCTGCACGGC
CTGGCGCGCAGGCCGGGCGAGGTGGTCTCCAAGAGCGAGCTGCTCGCCCAGGCGTGGGACTTCTCCTATGACGGCGACCC
GAACATCGTCGAGGTCTACATCAGCGCGCTCCGCCGGAAGATCGACTCTCCGTTCGGCCGGTCGTCCCTGGTGACCGTGC
GCGGTGCGGGATACCGGCTGGAGTCCTGA

Protein sequence : 
MRVLLVEDEKRLADLLKGGLAGEGFAVDVAHDGRDGLWMASENVYDVIVLDVMLPRMNGYTVCARLRDAENWTPILMLTA
KDGVHDEAEALDTGADDFLSKPFSYVVLLARLRALIRRGGRARPVSITVGDLTVDPAGLRCRRGEVEIALTPKEFAVLHG
LARRPGEVVSKSELLAQAWDFSYDGDPNIVEVYISALRRKIDSPFGRSSLVTVRGAGYRLES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_0102 YP_003335901.1 response regulator receiver protein BAC0125 Protein 1e-39 48
Sros_0102 YP_003335901.1 response regulator receiver protein BAC0083 Protein 1e-33 44
Sros_0102 YP_003335901.1 response regulator receiver protein BAC0308 Protein 3e-34 43
Sros_0102 YP_003335901.1 response regulator receiver protein BAC0197 Protein 4e-33 43
Sros_0102 YP_003335901.1 response regulator receiver protein U82965.2.orf14.gene. Protein 2e-22 43
Sros_0102 YP_003335901.1 response regulator receiver protein Y16952.3.orf35.gene. Protein 2e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_0102 YP_003335901.1 response regulator receiver protein VFG0596 Protein 1e-35 41