Gene Information

Name : Dd586_0952 (Dd586_0952)
Accession : YP_003332543.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1053654 - 1056212 bp
Length : 2559 bp
Strand : -
Note : KEGG: dze:Dd1591_3142 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; SMART: DNA mismatch repair p

DNA sequence :
ATGAGTACACCAGAGAGTTTAGACGCCCACACCCCCATGATGCAGCAGTATCTGAAGTTGAAAGCCCAGCATCCCGATAT
TTTGCTGTTTTACCGTATGGGCGACTTCTATGAGCTGTTTTATGACGATGCCAAACGCGCATCGCAATTGCTGGATATCT
CGCTCACCAAACGTGGCGCGTCAGCGGGTGAGCCGATTCCAATGGCCGGTGTCCCTCATCACGCGGTAGAAAACTATCTG
GCCCGGCTGGTGCAGTTAGGCGAATCCGTAGCCATTTGCGAACAAATTGGCGACCCGGCGACCAGCAAAGGGCCGGTAGA
ACGTAAAGTGGTGCGTATCGTTACCCCCGGCACCATCAGTGACGAAGCGCTGTTACAGGAAAAACAAGATAACCTGCTGG
CCGCCATCTGGCAGGAAAACCGGGGATTTGGTTACGCCACGCTGGACATCAGCTCTGGTCGTTTTCGTCTGGTAGAGCCG
GTTGATAAGGAAACCATGGCGGCTGAGTTGCAGCGCACCAACCCGGCGGAACTGCTCTATCCGGAAACGTTCGAAGCGAT
GTCCCTGATCGAACACCGCCACGGGCTGCGCCGCCGTCCGCTGTGGGAATTCGAGCTTGATACCGCTCGCCAGCAGCTCA
ACCTGCAATTTGGTACCCGCGATCTGACCGGTTTTGGCGTAGAGCAAGCCCGACTGGGCCTGCGTGCCGCGGGTTGTCTG
TTGCAGTACGCCAAAGATACCCAGCGTACATCGCTGCCGCATATCCGTGGCATCACCATGGAACGCCAGCAGGACGGCAT
TATTATGGATGCGGCAACCCGCCGTAATCTGGAACTGACGCAGAACCTGTCTGGTGGGGTCGACAACACGTTGGCTTCCG
TTCTCGACTGTACCGTGACCGCGATGGGCAGCCGTATGCTTAAGCGTTGGTTGCACGCCCCCATTCGCGATACTCAGGTG
TTGCTGCAACGTCAACAGGCTATCGGCGCGCTGCAGGATACCGCCACCGAACTGCAACCGTTTTTGCGTCAGGTCGGCGA
CCTGGAACGTATTCTGGCGCGTCTGGCGTTACGTTCCGCGCGCCCGCGTGATTTGGCCAGAATGCGTCACGCGTTTCAGC
AACTGCCCGATATCCATGCCCTGCTGGAAACCGTCAACGCCGAAGCCGTACAGCAGTTACGCGCCTCTATCGGCCATTTC
GATGAACTGCGCGACCTGCTGGAACGCGCCGTGGTAGAAACGCCGCCAGTGTTGGTGCGCGACGGTGGGGTTATTGCCAG
CGGTTACAACGACGAGCTGGATGAATGGCGCATGCTGGCTGACGGTGCCAGCGATTATCTGGATAAACTGGAGATCCGTG
AACGTGAGCGGCTCGGTATCGATACGCTGAAAGTCGGCTTTAACGGTGTACACGGTTATTACATTCAGGTCAGCCGTGGG
CAAAGCCACCTGGTGCCGATGAACTATGTCCGCCGTCAGACGCTCAAAAACGCCGAGCGTTACATCATTCCCGAACTGAA
AGAATACGAAGATAAGGTACTGACCTCAAAAGGCAAGGCGCTGGCGCTGGAAAAAGCGCTGTATGAAGGGCTGTTCGACC
TGTTATTGCCGCATCTGGCGGAACTCCAGCAAAGTGCATCTGCACTAGCGGAACTGGATGTGCTGAGCAACCTGGCCGAG
CGTGCCGACACACTGAATTACGTCTGCCCGACCCTGAGTGACAAACCGGGGATCAGAATCAGCGGCGGCCGTCACCCCGT
CGTCGAGCGGGTACTGAGCGAACCGTTTATTGCCAACCCCTTGTCACTGTCACCCCAGCGCCGACTGCTGATCATCACCG
GCCCCAATATGGGCGGGAAAAGCACCTACATGCGCCAGGCGGCGTTAATTGTCTTACTGGCACATATTGGCAGTTACGTC
CCAGCCGAACAGGCCGTCATTGGCCCGGTTGACCGTATATTCACCCGCGTCGGTGCTGCTGACGACCTCGCATCTGGCCG
ATCCACCTTTATGGTGGAAATGACGGAAACCGCCAATATTCTGCATAACGCTACCGAACACAGCCTGGTACTGATGGATG
AAATCGGGCGCGGCACCTCCACCTATGATGGTTTATCGCTGGCCTGGGCCTGTGCCGAAGCGCTGGCAAACAACATCAAA
GCCATGACGTTGTTCGCCACCCACTATTTCGAGCTCACCAACCTGCCGGAGAAAATGGAAGGGGTGATCAATATCCATCT
TGACGCACTGGAACACGGCGACACGATAGCCTTTATGCACAGCGTGCAGGAAGGGGCGGCCAGCAAGAGTTATGGACTGG
CGGTAGCCGCACTGGCTGGCGTACCCAAAGAAGTCATCAAACGGGCCAGACAAAAGCTGAAAGAACTGGAGTCACTGGCT
GGTCATGCCTCCGCCAGCCATGTTGATGGTTCGCAACTGGCGCTACTAACGCCAGAAGAGCCGTCACCAGCGCTGGAAGC
GCTGGAGTCTATCGACCCCGATGCGCTGACGCCGCGTCAGGCGCTGGACTGGTTATATAAATTAAAAGGCATGCTGTAA

Protein sequence :
MSTPESLDAHTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHHAVENYL
ARLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQEKQDNLLAAIWQENRGFGYATLDISSGRFRLVEP
VDKETMAAELQRTNPAELLYPETFEAMSLIEHRHGLRRRPLWEFELDTARQQLNLQFGTRDLTGFGVEQARLGLRAAGCL
LQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLSGGVDNTLASVLDCTVTAMGSRMLKRWLHAPIRDTQV
LLQRQQAIGALQDTATELQPFLRQVGDLERILARLALRSARPRDLARMRHAFQQLPDIHALLETVNAEAVQQLRASIGHF
DELRDLLERAVVETPPVLVRDGGVIASGYNDELDEWRMLADGASDYLDKLEIRERERLGIDTLKVGFNGVHGYYIQVSRG
QSHLVPMNYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYEGLFDLLLPHLAELQQSASALAELDVLSNLAE
RADTLNYVCPTLSDKPGIRISGGRHPVVERVLSEPFIANPLSLSPQRRLLIITGPNMGGKSTYMRQAALIVLLAHIGSYV
PAEQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAEALANNIK
AMTLFATHYFELTNLPEKMEGVINIHLDALEHGDTIAFMHSVQEGAASKSYGLAVAALAGVPKEVIKRARQKLKELESLA
GHASASHVDGSQLALLTPEEPSPALEALESIDPDALTPRQALDWLYKLKGML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_0952 YP_003332543.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 84