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Name : Dd586_0670 (Dd586_0670) Accession : YP_003332268.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 749086 - 750975 bp Length : 1890 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: dze:Dd1591_3389 polysaccharide biosynthesis protein CapD DNA sequence : ATGTTTAAACCCGTGCAACTTTTGCTTGGTGCTGAGCGCAGGAACAAACGCGTAGTGACCGTGATTTATGACATTATCGC GATTGTTTTTTCTCTTTATCTTGCTGTCGCCGTTCGTCTAGGCACCATAAACTTCCCCGTCGGTTATGCTGAGATAGCCA GCTTGCTGGTCACTCTATCCATCACCATCATGGTGTTTATACGCTGTGGAATGTATCGTGCGGTTTTACGCTACATGATG CTGCCCGCGCTGGGGTATGTATTTCTATCGGTTATTATCTCAGCCATCAGTCTGGCCTTAAGTAGCTTCTTTTTTCAGTC TTTTGTCCCACGTAGCGTGCCGTTTATTTACGCAGGTCTGGCGACACTTAGCCTTGGTGGGCCACGGGTACTGATCCGCA CCTTTTACTATCATTATTACAAACGACAGAAACCAAACGTTTTCATCTATGGGGCGGGCGCTACAGGGCGAGACTTGCTC TATGCCTTGATTCAAGGAGATGAATTTCACCCTGTTATCATTCTGGATGATGATGAGAGCAAAGCTGGCCAGATTATCTG TGGTATTCGGGTACACCACAGTAGTGAATTTGAAAAGCTGACACCGCTATATCAACCTGTAAAGCTATTGCTGGCTATAA ATAACATCAAGAAAGGCCAACGTCTCAGATTACTTGAGAAGCTTTCTCATTGGCCGATTGAAGTACAATCGGTTCCTTCA GTTGAAGACATTGCCGCAGGGCGAGCCTTTGCTTCCGAGATCCGCGATCTTGATGTGGCTGACCTGTTAGGACGTGCGCC TGTCGACCCAGATGAGACCCTGCTGGCCCAAAATATACGTGGTAAATCAGTGATGGTAACGGGAGCCGGCGGCTCCATCG GTTCTGAACTTTGTCGTCAGATTCTGTCGCAACATCCCCAAACGCTCGTATTACTTGAGTTGAACGAGTACAACTTATAT ACCATTGATCAAGAATTACAGAACATTAAACAACATCTCAAACTGGACACCCAAATCGTTGCCGCTTTAGGTTCTGTGCA AAAACAAAACCGCGTACAGCGACTTATTCAGGCACACCAGGTTGAAACAATCTACCACGCCGCAGCCTACAAACACGTTC CTCTTGTAGAAAGCAACGTTATTGAAGGAATACGCAACAATGTTTTCGGCACACTGGCCTGTGCGGAAGCAGCTATTCAG GCTGGAGTACGTAATTTTACGCTCATATCTACCGACAAAGCGGTTCGCCCCACCAATATTATGGGGACCAGTAAGCGAAT GGCTGAATTGGTGCTGCAAGCACTCGCAGACAAACAAGACAAAACACTATTTACGATGGTGCGCTTCGGCAATGTTCTGG GTTCATCCGGCTCCGTTGTCCCGCTATTCAAGCAACAAATCCGCAGAGGTGGGCCAGTTACAGTTACTCACCCAGATATT ATTCGCTACTTTATGCTTATTCCTGAAGCCGCACAGCTAGTCATTCAAGCCGCTACTATGGGTAAGAATGGACAAGTGTT CGTTCTGGATATGGGAGAGCCTGTAAAAATCCTCGATCTGGCGAGGCGGATGATCCACCTGATGGGCATGAAAGAATACA TTGAAGGGTATAATGAAGAAGGGGATATTGCGATTAAATTTACTGGATTACGCCCCGGAGAAAAACTCTATGAAGAATTA TTAATCGGTGGAAATGTCGAAGGTACCAGCCATCCCAAAATTATGGCGGCTCGGGAAGAAAAATTGAGTTGGCAAGAGAT GAAGTTACTGCTCGCACAATTAGATGCTGCTTGTCATCAGTTTGATGTTGAATCGATAAAAAAAATTTTACTGGAAGCGC CAACAAATTATATGCCTGAACCCAACAGAAGCGCTGATAGCGCCAGCTGA Protein sequence : MFKPVQLLLGAERRNKRVVTVIYDIIAIVFSLYLAVAVRLGTINFPVGYAEIASLLVTLSITIMVFIRCGMYRAVLRYMM LPALGYVFLSVIISAISLALSSFFFQSFVPRSVPFIYAGLATLSLGGPRVLIRTFYYHYYKRQKPNVFIYGAGATGRDLL YALIQGDEFHPVIILDDDESKAGQIICGIRVHHSSEFEKLTPLYQPVKLLLAINNIKKGQRLRLLEKLSHWPIEVQSVPS VEDIAAGRAFASEIRDLDVADLLGRAPVDPDETLLAQNIRGKSVMVTGAGGSIGSELCRQILSQHPQTLVLLELNEYNLY TIDQELQNIKQHLKLDTQIVAALGSVQKQNRVQRLIQAHQVETIYHAAAYKHVPLVESNVIEGIRNNVFGTLACAEAAIQ AGVRNFTLISTDKAVRPTNIMGTSKRMAELVLQALADKQDKTLFTMVRFGNVLGSSGSVVPLFKQQIRRGGPVTVTHPDI IRYFMLIPEAAQLVIQAATMGKNGQVFVLDMGEPVKILDLARRMIHLMGMKEYIEGYNEEGDIAIKFTGLRPGEKLYEEL LIGGNVEGTSHPKIMAAREEKLSWQEMKLLLAQLDAACHQFDVESIKKILLEAPTNYMPEPNRSADSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-74 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-71 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd586_0670 | YP_003332268.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 4e-101 | 52 |
| Dd586_0670 | YP_003332268.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-74 | 43 |
