|
Name : Dd586_0641 (Dd586_0641) Accession : YP_003332239.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 714143 - 715660 bp Length : 1518 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dze:Dd1591_3422 lysyl-tRNA synthetase DNA sequence : ATGTCTGAACCACAAAATCAGGGTGCCGAGCAGGCGCTGGATCTTAACAACGAACTCAGAACCCGCCGTGAGAAGCTGGC GGCGTTGCGTGATACCGGCATCGCTTTTCCGAACGATTTCCGCCGTGACAGCACCGCTGATCAACTGCATGCCAGCTATG ACGAAAAAGAGAACGAAGAGCTGGAGGCACTGGGTCTGGAAGTGACGGTGGCTGGTCGTATGATGACCCGCCGTATCATG GGTAAGGCGTCGTTTGTGACCTTGCAGGATGTCGGCGGCCGTATTCAGTTGTATGTGGCGCGTGATGACCTGCCGGAAGG CGTCTACAACGAGCAGTTCAAAAAATGGGATTTGGGCGACATCCTTGGCGCACGCGGTAAGCTGTTTAAAACCAAGACTG GCGAGCTGTCTATCCACTGTACCGAATTGCGTCTGCTGACCAAAGCGTTGCGCCCGTTGCCGGACAAATTCCACGGCCTG GCGGATCAGGAAACCCGTTATCGCCAGCGTTATCTGGACCTGATCGCCAACGACGAATCCCGCCACACTTTCCGTGTGCG TTCGCAGATTCTGGCTGGTATTCGCCAGTTCATGGTCGGTCGTGATTTTATGGAAGTCGAAACGCCGATGATGCAGGTGA TCCCCGGCGGGGCGTCTGCTCGTCCGTTCATCACCCATCACAATGCGCTCGATATCGACATGTATCTGCGTATCGCGCCA GAGCTGTACCTGAAGCGTCTGGTGGTCGGTGGTTTTGAGCGTGTATTCGAGATCAACCGTAACTTCCGTAACGAAGGTGT GTCGCCGCGTCATAACCCTGAGTTCACCATGATGGAACTCTACATGGCGTATGCGGACTACAAAGACCTGATCGAACTGA CCGAGTCACTGTTCCGCACGCTGGCGCAGAACGTTCTGGGCACCACCGAGGTGCCGTATGGCGACCAGGTGTTTGATTTC GGTAAGCCGTTCGAGAAGCTGACCATGCGTGAAGCCATCAAGAAATACCGTCCGGAAACCAACCTGGCGGATCTCGATAG CTTCGATGCAGCGAAAGCCATCGCGGAATCTATCGGCATCAAGGTAGAGAAGAGCTGGGGTCTGGGCCGTATCGTCACTG AGATCTTCGAAGAAGTGGCAGAAGCCCATCTGATCCAGCCGACATTTATCACCGAATACCCGGCCGAAGTGTCGCCATTG GCTCGTCGCAACGACCAGAACCCGGAAATCACCGACCGCTTTGAGTTCTTCATCGGCGGACGTGAGATCGGCAACGGTTT CTCCGAACTGAACGACGCGGAAGATCAGGCTCAACGCTTCCAGGATCAGGTTGCAGCGAAAGATGCTGGTGACGACGAAG CGATGTTCTACGACGAAGACTATGTTACCGCTCTGGAGCATGGTTTGCCGCCGACCGCGGGGCTGGGCATTGGTATCGAC CGTATGGTGATGCTGTTTACCAACAGTCACACCATTCGCGACGTGATCCTGTTCCCGGCGATGCGTCCGCAGAAATAA Protein sequence : MSEPQNQGAEQALDLNNELRTRREKLAALRDTGIAFPNDFRRDSTADQLHASYDEKENEELEALGLEVTVAGRMMTRRIM GKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANDESRHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVPYGDQVFDF GKPFEKLTMREAIKKYRPETNLADLDSFDAAKAIAESIGIKVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPL ARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-171 | 69 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-93 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd586_0641 | YP_003332239.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-172 | 69 |
