Gene Information

Name : Dd586_0637 (Dd586_0637)
Accession : YP_003332235.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 709394 - 710293 bp
Length : 900 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dze:Dd1591_3426 tyrosine recombinase XerD

DNA sequence :
ATGCAGAAACAGGATCAGGCCTTAATCGAGCAGTTTCTGGATGCCTTGTGGCTGGAGCGCAATCTGGCGGAAAATACGTT
GTCGTCCTATCGCAATGATCTGTCTTCGCTGGCGGAGTGGCTGGCGCACCATGACCGTCATCTGCTGGAGGCGCAGCCGT
CTGATCTGCAGGATTTTCTGGCTGAGCGACTGGAGGGGGGGTACAAGGCCACCAGTTCGGCGCGTTTGCTAAGCGCAATG
CGGCGCCTGTTTCAGTATCTGTACCGTGAAAAGCGACGAACGGATGACCCGAGTGCGCCGTTGTCTTCCCCTAAGCTGCC
GCAGCGATTACCGAAGGATCTCACTGAAGCACAGGTGGAAGCGCTGCTGGCGGCACCGGTTACCGATCAGCCGATCGAAC
TGCGGGATAAGGCGATGCTGGAACTGCTGTACGCGACCGGTCTGCGTGTATCGGAACTGGTGGGGCTGACGATGAGCGAT
GTCAGTCTGCGCCAGGGGGTGGTACGCGTCGTGGGGAAAGGCAACAAGGAGCGATTGGTGCCGCTGGGGGAAGAGGCCGT
GTACTGGCTGGAGCAGTATCTGGAGTACAGTCGTCCCTGGCTGCTAAATGGGCAGACGCTGGATGTGCTGTTTCCGAGTA
ACCGTGCCCAGCAGATGACGCGCCAGACGTTCTGGCACCGTATCAAGCACTATGCGACACTGGCGTCTATTGACAGCAAT
AAACTTTCTCCGCATGTTTTGCGTCATGCCTTTGCAACCCACCTGCTGAATCACGGTGCGGATCTGCGGGTGGTGCAGAT
GTTATTGGGCCACAGCGATCTTTCCACCACGCAGATTTATACCCACGTTGCGACGGAGAGGTTGAAACAACTGCATCAAC
AGCACCATCCCCGGGCATGA

Protein sequence :
MQKQDQALIEQFLDALWLERNLAENTLSSYRNDLSSLAEWLAHHDRHLLEAQPSDLQDFLAERLEGGYKATSSARLLSAM
RRLFQYLYREKRRTDDPSAPLSSPKLPQRLPKDLTEAQVEALLAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTMSD
VSLRQGVVRVVGKGNKERLVPLGEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSN
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-59 51
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-59 51