Gene Information

Name : Dd586_0510 (Dd586_0510)
Accession : YP_003332110.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 571009 - 571440 bp
Length : 432 bp
Strand : +
Note : KEGG: dze:Dd1591_3563 transcriptional regulator, MerR family; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR

DNA sequence :
ATGAAAATTGGCGATCTGTCGAAAGCGACCAACACCACACCGGAAACCATTCGTTTTTATGAGAAGAAAGGGCTATTGCC
CGAACCGGAACGTACCGAAGGGAACTATCGTCACTATCATCAGTTCCATGTCGACAGGCTGCGGTTTATCCGTAACTGCC
GCTCACTGGACATGAACCACGATGAAATTCGCGCGCTGATTGCGCTGAGCGAGCAACCGGCCGCCAGTTGTGAAGGGGTA
AACGCGCTGCTGAATGAGCATCTGGGGCATGTCGAAGCACGCCTGGCGCAGTTACAGCAACTGAAAGCGCAACTGATGGA
TATCAGCCAGCGCTGTCAGGTGACGCAAACGGTGGATGACTGTGGCATTTTGCACGGGTTGTCCGAGCTGGAGCCTGAAG
ACAGCAGCATCGGGCATACGCATTTAGGCTAA

Protein sequence :
MKIGDLSKATNTTPETIRFYEKKGLLPEPERTEGNYRHYHQFHVDRLRFIRNCRSLDMNHDEIRALIALSEQPAASCEGV
NALLNEHLGHVEARLAQLQQLKAQLMDISQRCQVTQTVDDCGILHGLSELEPEDSSIGHTHLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-28 46
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-26 46
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-26 46
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 3e-26 46
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-26 46
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 3e-26 46
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-26 46
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-26 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_0510 YP_003332110.1 MerR family transcriptional regulator BAC0301 Protein 1e-30 53
Dd586_0510 YP_003332110.1 MerR family transcriptional regulator BAC0058 Protein 5e-31 50