Gene Information

Name : Dd586_0503 (Dd586_0503)
Accession : YP_003332103.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 562022 - 563020 bp
Length : 999 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: dze:Dd1591_3575 transport system permease protein

DNA sequence :
ATGAGGTCGTGTCGCCACTATACGGTGGTCTGCCTGCTCACGCTGTTGGTGCTGCTGGTGGTGATGCTCTTTAGCACTGC
GGTGGGGGCCATCCGGATCCCGCTGACGCAGGTACTGGCGGCGCTGATGCCGGAACACCCTGGCGTACCGGAGACGGTGC
GCCGCATCGTGCTGGAGCTGCGTGTGCCGCGTACGCTGCTGGCGGCCATCACCGGCGCCGGGCTGGCGATGGTCGGCGCG
TTGCTGCAAACCACCACCCGCAATGATCTGGCCGATCCCTTTCTGTTCGGGTTGTCCTCCGGTGCGTCGGCGGGGGCTGT
GCTGGTGATAACCCGCTTTGGCGAATGGTTTGGGGCCTTCACGCTACCGGTTGCGGCGTTTGGCGGGGGAATTTGCTCGG
CACTGTCGGTGACGCTGCTGTTTTTTCTGCGTGAGGGGCGACAGGCGGAGCATCTGGTGATCTGTGGGCTGGCGATTTCC
TTTCTGTTTGGGGCGTTAACCAGCTATCTGGTGTTTTCCGGTGACCAACGCGCTGCCAGTGCGGTGCTGTTCTGGTCTCT
GGGCGGGCTGGGGCTGGCGCGTTGGGATAATCTGCCGGTAGCGCTGTGCAGCCTGTTGATATTGATTGGCGTTGTGATGA
CGCGCTGGCGGGCGCTGGACAGTTTGCTGGCCGGTGAACAGACGGCGACGTCGATGGGGGTTAATGTTAACCGGCTGCGC
CTTGAGGTGTTCCTGTGCTGCGCGCTGGCGACGGCATTGTTGGTGTCACTGACCGGGGTGATCGGATTTGTCGGGCTGAT
GGTGCCGCATTTGTGCCGTCCGTTGGTCGGTACGCGCCATCGACGATTACTGGTGCTGTGTGGCTTGCTGGGGGCGGTGT
TGCTGAGTATCGGCGATACCTTAAGCCGTATCTTGCTGGCGTCGCAGGAACTCCCGGTGGGGATTGTGACCGCCGGGTTA
GGCGGTATTTTTGTGATTGTGCTACTGGCAAAACGTTAG

Protein sequence :
MRSCRHYTVVCLLTLLVLLVVMLFSTAVGAIRIPLTQVLAALMPEHPGVPETVRRIVLELRVPRTLLAAITGAGLAMVGA
LLQTTTRNDLADPFLFGLSSGASAGAVLVITRFGEWFGAFTLPVAAFGGGICSALSVTLLFFLREGRQAEHLVICGLAIS
FLFGALTSYLVFSGDQRAASAVLFWSLGGLGLARWDNLPVALCSLLILIGVVMTRWRALDSLLAGEQTATSMGVNVNRLR
LEVFLCCALATALLVSLTGVIGFVGLMVPHLCRPLVGTRHRRLLVLCGLLGAVLLSIGDTLSRILLASQELPVGIVTAGL
GGIFVIVLLAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 3e-24 42
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 3e-24 42
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 3e-24 42
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 7e-24 41