Gene Information

Name : Dd586_0408 (Dd586_0408)
Accession : YP_003332009.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 466466 - 467287 bp
Length : 822 bp
Strand : +
Note : PFAM: protein of unknown function DUF932; KEGG: dze:Dd1591_0931 protein of unknown function DUF932

DNA sequence :
ATGACCCGTCTGGCCTCGTGCTTTGGCGCAGCAAACCTGATTCGCCGTGACCGTCCGTTAACCCGCGAAGAGCTGTTTCG
CACCGTACCCAGTGTGTTCAGTGAGGAAAAGCATGAATCCCGCAGCGACCGATACACTTACATTCCGACGATTACCCTTC
TGGATAATTTGCAACGTGAAGGCTTCCAGCCGTTCTTTGCCTGCCAGACCCGTGTGCGCGACGACAGCCGCCGCGAGCAC
ACCAAACACATGCTGCGCCTGCGTCGGGAGGGGCAAATCGCCGGCCATCAGGTGCCGGAAATCATCCTGCTCAACAGCCA
TGACGGCTCCAGTTCGTACCAGATGCTGCCGGGGCTGTTCCGGCAGGTCTGCCAGAACGGGCTGATTTGCGGCGAAAGTT
TTGGCGAGGTGCGGGTGCCCCATAAAGGCGATGTGGTGGGCCGGGTGATTGAAGGCGCTTATGAGGTGCTGGATACCTTT
GAGCGCATCGAGGAAAAGCGTGACGCCATGCAGTCGCTGCTGTTACCGCCTCCGGCGCAATCCGCGCTGGCAAACGCCGC
CCTGACGTACCGTTTTGGTGAGGCGCATCAGCCGGTGACGGCAGCGCAAATCCTGACGCCGCGCCGCTGGCAGGACGACC
GGCAAGACCTGTGGACTACCTTTCAGCGTATTCAGGAGAACCTGATAAAGGGCGGGCTGCCCGGTCGCAATCCGCAGGGG
AAACGGGCCCGCACCCGTGCTGTCAGCAGTATCGACAACGATGTGCGGCTCAACCGGGCGCTGTGGGTGCTGGCGGAATC
GCTGCTGCAACATGCCGACTAA

Protein sequence :
MTRLASCFGAANLIRRDRPLTREELFRTVPSVFSEEKHESRSDRYTYIPTITLLDNLQREGFQPFFACQTRVRDDSRREH
TKHMLRLRREGQIAGHQVPEIILLNSHDGSSSYQMLPGLFRQVCQNGLICGESFGEVRVPHKGDVVGRVIEGAYEVLDTF
ERIEEKRDAMQSLLLPPPAQSALANAALTYRFGEAHQPVTAAQILTPRRWQDDRQDLWTTFQRIQENLIKGGLPGRNPQG
KRARTRAVSSIDNDVRLNRALWVLAESLLQHAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-91 73
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-91 73
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-88 73
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-88 73
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-88 73
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-91 73
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-87 72
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-88 72
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-90 72
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-91 72
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 8e-88 72
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 8e-88 72
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 4e-88 72
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-87 71
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-87 71
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-73 56
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 3e-75 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_0408 YP_003332009.1 hypothetical protein VFG1526 Protein 8e-92 73
Dd586_0408 YP_003332009.1 hypothetical protein VFG1615 Protein 1e-90 72
Dd586_0408 YP_003332009.1 hypothetical protein VFG0658 Protein 4e-88 72
Dd586_0408 YP_003332009.1 hypothetical protein VFG1676 Protein 7e-88 71