Gene Information

Name : Dd586_4124 (Dd586_4124)
Accession : YP_003335656.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 4714931 - 4716340 bp
Length : 1410 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: dze:Dd1591_4156 glutamine synthetase, type I

DNA sequence :
ATGTCAGTAGAACACGTTTTGACGATGCTGAATGAGCATGAGGTGAAGTTTGTTGACCTTCGCTTCACGGATACCAAAGG
CAAAGAGCAGCACGTCACTATTCCGGCCCACCAGGTTAATGCTGACTTCTTCGAAGACGGTAAAATGTTTGATGGTTCCT
CGATTGGCGGCTGGAAAGGCATCAACGAATCCGACATGGTGTTAATGCCGGACGCGACTACTGCGGTTATGGATCCGTTC
TTCGAAGAACCGACTCTGATCATCCGTTGTGACATTCTGGAACCGGGCACCATGCAGGGTTATGACCGTGACCCTCGCTC
CATCGCTAAACGTGCTGAAGACTTCCTGCGCTCTTCCGGTATCGCTGATACCGTACTGTTCGGGCCAGAGCCGGAATTCT
TCCTGTTTGACGACGTACGTTTCGGCAGCAGCATCTCCGGTTCCCACGTTGCTATCGACGACATCGAAGGTGCCTGGAAC
TCCAGCACCAAATACGAAGAAGGCAACAAAGGCCACCGTCCGGCAGTGAAAGGCGGTTACTTCCCGGTTCCGCCGGTAGA
CTCTGCGCAGGACTTGCGTTCTGCCATGTGTCTGACCATGGAGCAGATGGGCCTGGTAGTTGAAGCGCATCACCACGAAG
TAGCGACCGCTGGTCAGAACGAAGTGGCTACCCGCTTCAACACCATGACCAAGAAAGCCGACGAAATCCAGATCTACAAA
TACGTTGTACACAACGTGGCACACGCCTTCGGCAAAACCGCAACCTTCATGCCGAAACCGATGTTCGGCGATAACGGTTC
CGGTATGCACTGCCACATGTCTCTGGCTAAAGACGGTACTAACCTGTTCTCCGGCGACAAATACGGCGGCCTGTCTGAAA
CCGCGCTGTACTACATCGGCGGTGTAATCAAACACGCTAAAGCCATCAACGCGCTGTCCAACCCGACCACCAACTCCTAC
AAGCGTCTGGTCCCGGGTTACGAAGCGCCGGTTATGCTGGCTTACTCTGCCCGTAACCGTTCTGCCTCCATCCGTATTCC
GGTGGTATCGAGCCCGAAAGCACGTCGTATCGAAGTACGCTTCCCGGACCCGGCTGCTAACCCGTACCTGTGCTTCGCTG
CACTGCTGATGGCTGGTCTGGACGGCATCATCAACAAGATCCACCCGGGCGATGCCATGGACAAGAACCTGTACGATCTG
CCGCCGGAAGAAGCGAAAGAGATCCCAACCGTAGCAGGCTCTCTGGAAGAAGCGTTGAACGCCCTGAACGCAGACCGCGA
GTTCCTGACCCGTGGCGGCGTATTCACTGACGACGCTATCGATGCTTACATCGAACTGCGTATTGCTGAAAACGACCGCG
TTCGCATGACGCCGCACCCGGTTGAGTTCGAACTGTACTACAGCGTGTAA

Protein sequence :
MSVEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEDGKMFDGSSIGGWKGINESDMVLMPDATTAVMDPF
FEEPTLIIRCDILEPGTMQGYDRDPRSIAKRAEDFLRSSGIADTVLFGPEPEFFLFDDVRFGSSISGSHVAIDDIEGAWN
SSTKYEEGNKGHRPAVKGGYFPVPPVDSAQDLRSAMCLTMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK
YVVHNVAHAFGKTATFMPKPMFGDNGSGMHCHMSLAKDGTNLFSGDKYGGLSETALYYIGGVIKHAKAINALSNPTTNSY
KRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIINKIHPGDAMDKNLYDL
PPEEAKEIPTVAGSLEEALNALNADREFLTRGGVFTDDAIDAYIELRIAENDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-100 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_4124 YP_003335656.1 glutamine synthetase VFG1399 Protein 3e-113 51