Gene Information

Name : Dd586_4117 (Dd586_4117)
Accession : YP_003335649.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 4704522 - 4706603 bp
Length : 2082 bp
Strand : +
Note : KEGG: dze:Dd1591_4149 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase do

DNA sequence :
ATGGATAGCCGCCTGCTGCATACCCAGCCGTTGAGCACCCTTGCCGGCGTCGGGGCCAGCCAGGCGGAAAAACTGGCCCG
CCTTGGTCTGGAAACGGTGCAGGATCTGCTGCTGCATCTGCCTCTTCGCTACGAAGACCGCACCCATCTTTATCACATTA
ACGATCTGTTGCCGGGCATGTACGCTACGGTAGAAGGCGATGTGCTGCGCAGCGATATCACCTTCGGCCAACGCCGAATG
CTGACCTGCCAAATCAGCGACGGCAGCGGCATGCTCACGCTACGTTTCTTTAATTTCAACGCGGCTATGAAAAATAGCCT
GTCGCCGGGCCAGCGCGTACTGGCTTATGGGGAAATACGACGCGGCAAGCTGGGCGGCGAAATGATCCATCCGGAATACC
GGGTGCAGGGCGAAAGCGCGACTGTCGAGCTGCAAGAAACACTGACGCCGGTTTATCCCACCACCGAGGGCGTGCGGCAG
GCGACGCTGCGTAAGCTGACCGACCAGGCGCTCAAACTGCTGGATACCCATCCGATTGACGAACTCCTGCCCCAGGAAAT
GCGCCACGGATTGATCAGCCTGCCAGATGCGTTACGCACCCTGCACCGCCCACCACCGGATGTAAAGCTGGCGGAATTGG
AACAGGGGAAGCACCCGGCACAGCAACGTCTGGTGATGGAAGAACTTCTGGCACACCACCTGAGTATGCTGGCGGTACGC
GCGGGTGCACAGCGCCACCGGGCGCTGGCGCTGGATACCAAAGACGACCTGAAGCAACAACTGCTGGCCGCGCTGCCGTT
CAGCCCGACCGGCGCGCAACAACGGGTGGTGGCGGAAATCGAACAGGATATGAATCAACCCTTTCCGATGATGCGTCTGG
TTCAGGGCGATGTCGGCTCCGGTAAAACACTGGTCGCAGCGTTGGCGGCGTTGCGGGCCATCGCTCACGGCAAACAGGTG
GCGTTGATGGCACCAACGGAATTGCTGGCTGAGCAACATGCCGCCAATTTCCGTCGCTGGTTCGAACCACTGGGCATTGA
GGTGGGCTGGCTCGCGGGCAAGCAAAAGGGTAAGGCGCGGCAAGCCCAGCAGGAGGCTATCGCCAGTGGACAGGTTTCCA
TGGTGATCGGCACCCATGCTATTTTTCAGCAACAGGTTCAGTTCAGCGGCCTGGCGTTGGTGATTATCGACGAACAACAC
CGATTTGGCGTGCATCAGCGGCTGGCGTTGTGGGAAAAAGGCGAAGAGCAGGGCTTCCACCCTCACCAGTTGATCATGAC
TGCCACACCGATTCCCCGCACACTGGCGATGACCGCCTATGCCGACCTGGACACCTCGGTCATCGATGAGCTGCCACCGG
GCCGCACACCGGTAACCACCGTCGCCATTCCCGACACCCGCCGCGCCGACATCATTGAGCGGGTGCGCCATGCCTGTCTG
CAAGAAGGGCGGCAGGCATACTGGGTCTGCACCCTGATTGAAGAATCCGAACTGTTGGAAGCACAGGCGGCCGAAGCGAC
CTGCCAGGAACTAAAAGCCGCGTTACCCGAGCTCACGGTTGGTCTGGTACATGGCCGGATGAAAGCCCAGGAAAAACAGG
CCGTCATGGAAGCATTCAAAACCAACCAACTGCACCTGTTGGTCGCAACGACAGTAATTGAAGTGGGCGTGGATGTGCCG
AATGCCAGCCTGATGATCATCGAAAACCCGGAGCGACTGGGGTTGGCGCAGTTACACCAGTTGCGTGGCCGCGTCGGCCG
TGGTGCCGTCGCCTCCCACTGCGTATTACTGTACAAATCGCCACTAAGTAAAACCGCGCAAATGCGGCTTCAGGTTCTGC
GCGATAGCAATGATGGCTTCGTCATCGCCCAGCGCGACCTGGAAATTCGCGGGCCCGGCGAACTGCTCGGCACCCGTCAG
ACCGGTAACGCTGCCTTCAAGGTGGCAGATTTACTGCGCGATCAGGCTTTGATTCCGCAAGTCCAACGGGTATCACGCCA
TATCCATGAGCACTACCCGGAACACGCCAGAGCACTGATCGAGCGCTGGCTGCCAGAACGCACCCGTTATACCAACGCCT
GA

Protein sequence :
MDSRLLHTQPLSTLAGVGASQAEKLARLGLETVQDLLLHLPLRYEDRTHLYHINDLLPGMYATVEGDVLRSDITFGQRRM
LTCQISDGSGMLTLRFFNFNAAMKNSLSPGQRVLAYGEIRRGKLGGEMIHPEYRVQGESATVELQETLTPVYPTTEGVRQ
ATLRKLTDQALKLLDTHPIDELLPQEMRHGLISLPDALRTLHRPPPDVKLAELEQGKHPAQQRLVMEELLAHHLSMLAVR
AGAQRHRALALDTKDDLKQQLLAALPFSPTGAQQRVVAEIEQDMNQPFPMMRLVQGDVGSGKTLVAALAALRAIAHGKQV
ALMAPTELLAEQHAANFRRWFEPLGIEVGWLAGKQKGKARQAQQEAIASGQVSMVIGTHAIFQQQVQFSGLALVIIDEQH
RFGVHQRLALWEKGEEQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRADIIERVRHACL
QEGRQAYWVCTLIEESELLEAQAAEATCQELKAALPELTVGLVHGRMKAQEKQAVMEAFKTNQLHLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQMRLQVLRDSNDGFVIAQRDLEIRGPGELLGTRQ
TGNAAFKVADLLRDQALIPQVQRVSRHIHEHYPEHARALIERWLPERTRYTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 6e-90 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_4117 YP_003335649.1 ATP-dependent DNA helicase RecG BAC0356 Protein 4e-173 60