Gene Information

Name : Dd586_3933 (Dd586_3933)
Accession : YP_003335469.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 4499125 - 4500285 bp
Length : 1161 bp
Strand : -
Note : KEGG: dze:Dd1591_0120 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGACGCGTAAACAGGCTACTATCGCAGTCCGCAGTGGGTTAAACAACGACGAGCAGTTCGGTTGCGTTGTTCCCCCGAT
TCACCTCTCCAGTACTTACAACTTCACCGGTTTTAATGAGCCCAGAGCGCATGACTATTCACGGCGCGGCAATCCGACCC
GTGATGTTGTCCAGCGTGCGCTGGCGGAACTGGAAGGCGGGGCGGGCGCGGTCATGACCAGCAGCGGTATGTCGGCTATC
ATGCTGGTTTGTACGGTATTCCTAAAGCCTGGTGACCTGTTGGTAGCACCACATGATTGCTACGGCGGCAGCTATCGTTT
GTTTGATAGCCTGAGCAAACGCGGGGCTTTCAACGTGAAATTCGTCGATCAGGGCAATCTGGCGGAGCTTAACGCCGCCC
TGGCGGAAAAACCAAAACTGGTGCTGGTTGAAAGCCCCAGCAACCCGCTTCTGCGCGTCGTGGATATCGCCGCTATCTGT
CAGGCAGCGCGTGATGTCGGGGCGGTGAGCGTGGTGGATAACACCTTCCTGAGCCCGGCGTTGCAAAATCCGCTCAAACT
GGGTGCGGATCTGGTGGTGCATTCCTGTACCAAATACCTTAACGGTCATTCGGATGTGGTGGCTGGGGCGGTGATTGCCC
GCGACCCCGATGTGGCGACGGAACTGGCCTGGTGGGCTAACAACATTGGTGTGACCGGTGCGGCGTTTGACAGCTACCTG
TTGCTGCGTGGTATGCGTACGCTGTCGCCACGTATGGCGATGGCGCAGAAGAATGCATTGCAAATTGTGGAGTATTTGCG
GCATCAGCCACTGGTCAAGGCGTTGTATCATCCTTCTTTGCCCGAGAATGCCGGCCATGAGATTGCCTGTCGGCAGCAGT
CCGGCTTTGGCGCGATGCTGAGTTTTGAGCTGGATGGCGATGAAGATACCCTGCGTCGTTTTCTGTCCGCGCTGGATCTG
TTCACGCTGGCGGAGTCGCTGGGTGGCGTCGAGAGTCTGATTTCTCATGCCGCGACCATGACTCACGCAGGTATGGCACC
GCAAGCGCGCGCCGCCGCCGGTATCTCGGAAACGTTATTGCGTATTTCTGTCGGCATTGAAGATGGTGACGATCTGGTCG
CCTCACTGGACAGAGCATTTCAGGCAGCAGCCAAGAGGTAA

Protein sequence :
MTRKQATIAVRSGLNNDEQFGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVMTSSGMSAI
MLVCTVFLKPGDLLVAPHDCYGGSYRLFDSLSKRGAFNVKFVDQGNLAELNAALAEKPKLVLVESPSNPLLRVVDIAAIC
QAARDVGAVSVVDNTFLSPALQNPLKLGADLVVHSCTKYLNGHSDVVAGAVIARDPDVATELAWWANNIGVTGAAFDSYL
LLRGMRTLSPRMAMAQKNALQIVEYLRHQPLVKALYHPSLPENAGHEIACRQQSGFGAMLSFELDGDEDTLRRFLSALDL
FTLAESLGGVESLISHAATMTHAGMAPQARAAAGISETLLRISVGIEDGDDLVASLDRAFQAAAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-56 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-58 42