Gene Information

Name : Dd586_0386 (Dd586_0386)
Accession : YP_003331988.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 438638 - 439642 bp
Length : 1005 bp
Strand : -
Note : TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: cko:CKO_03557 ornithine carbamoyltransferase

DNA sequence :
ATGTCTATTAATCTTTATAACCGCCATTTTCTTAAATTGCTGGATTTTACACCGGCGGAAATTCAGCACCTGATTAACCT
CGCAATGGAGTTGAAAAAAGCAAAATACAACGGTACGGAGCAGGCGAAATTAACCGGTAAAAATATTGCGCTGATCTTTG
AAAAAACCTCAACCCGCACCCGTTGTGCGTTTGAGGTCGCCGCCTTTGATCAAGGCGCACAGGTCACCTATCTCGGTCCA
AGCGGTTCACAAATCGGCCATAAAGAGTCTATGAAAGATACAGCCCGCGTGCTGGGAAGAATGTACGACGGTATTGAATA
CCGCGGATTTGGTCAGTCGATCGTTGAAGAACTGGCCCGCTTTGCCGGCGTCCCCGTGTGGAACGGTCTGACTGACGAAT
ACCACCCGACACAAATTCTGGCTGACTTGATGACCATGCTGGAGCACGCGCCCGGCAAGCAACTCGGCCAGTTGGCTTTC
GCCTATCTGGGCGATGCCCGTAACAACATGGGGAATTCGCTGATGGTGGGCGCGGCCAAGATGGGCATGGATATCCGGCT
GGTCGCCCCGCGAGCCTACTGGCCGGATGAAAAGCTGGTTCAACAGTGTCGGGATATCGCCAGTCAGACCGGCGGCCGGA
TCACCCTGACGGAATATGTCGATGAGGGGGTGGCGGGCGTTGATTTTCTCTATACCGATGTTTGGGTATCGATGGGCGAG
CCCAAAGCGGCCTGGGCCGAACGGGTCAGTCTGATGAAACCGTACCAGATTAATCGCGCCGTGATGGACGCCACCGGCAA
CCCACAGGTGAAATTCATGCACTGCCTGCCCGCTTTTCATAACGAACACACGCTGCTCGGCCGTGAAATCGAACAAACCT
ACCACCTTAAAGGGCTGGAAGTGACGGAGGAGGTGTTCGAATCGGATTACTCCATTGTTTTCGATGAAGCCGAAAACCGT
ATGCACACCATTAAAGCCATCATGGTTGCCACACTAGCTGGCTAA

Protein sequence :
MSINLYNRHFLKLLDFTPAEIQHLINLAMELKKAKYNGTEQAKLTGKNIALIFEKTSTRTRCAFEVAAFDQGAQVTYLGP
SGSQIGHKESMKDTARVLGRMYDGIEYRGFGQSIVEELARFAGVPVWNGLTDEYHPTQILADLMTMLEHAPGKQLGQLAF
AYLGDARNNMGNSLMVGAAKMGMDIRLVAPRAYWPDEKLVQQCRDIASQTGGRITLTEYVDEGVAGVDFLYTDVWVSMGE
PKAAWAERVSLMKPYQINRAVMDATGNPQVKFMHCLPAFHNEHTLLGREIEQTYHLKGLEVTEEVFESDYSIVFDEAENR
MHTIKAIMVATLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-101 61
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-100 61
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-100 61
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-99 61
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-99 61
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-100 61
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-99 61