Gene Information

Name : Dd586_3823 (Dd586_3823)
Accession : YP_003335359.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : type VI secretion system effector, Hcp1 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 4359192 - 4359674 bp
Length : 483 bp
Strand : -
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: dze:Dd1591_2696 type VI secretion system effector, Hcp1 family

DNA sequence :
ATGTCATATATTATTTATCTAACTTTAGAAGGCGATCAGCAGGGATTGATTTCTTCTGGCTGTTCTACTATAGATTCTAT
CGGTAATCGTTACCAGTCTGGACACGAAGATCAGATACAGGTATTAGGATTGAACCATACGATAACACGAGATGATAATG
TCGCTCATCATCCGATACAATTAGTAAAGCCTATCGATAAATCTTCTCCATTGTTAGGTGTATCCATTACCTCAAATGAA
AAATTAACGGCAAAAATTTTCTTCTATAGAACGAATTCGGCTGGGAAGCTGGAGGTTTTTTATGAATTAACATTGGCTGA
TGCCAGAGTGGTATCTGTATCTTCATCGTATCCACACTCCATAAATAATACAGAATCAATCCCGTATGAAGAAATTATGC
TTAAATATAAAAGCATATCTTGGTCGCATAAGGCTGCCGGTACTTCTGGTTATAGTATCTGGCATGATGGAATTAACGAA
TAG

Protein sequence :
MSYIIYLTLEGDQQGLISSGCSTIDSIGNRYQSGHEDQIQVLGLNHTITRDDNVAHHPIQLVKPIDKSSPLLGVSITSNE
KLTAKIFFYRTNSAGKLEVFYELTLADARVVSVSSSYPHSINNTESIPYEEIMLKYKSISWSHKAAGTSGYSIWHDGINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec32 YP_851413.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-34 49
orf23 AAO17189.1 Orf23 Not tested tcd island Protein 1e-33 49
aec32 AAQ96726.1 Aec32 Not tested AGI-1 Protein 8e-35 49