Gene Information

Name : Dd586_0357 (Dd586_0357)
Accession : YP_003331959.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : virulence-like outer membrane protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 409080 - 409655 bp
Length : 576 bp
Strand : -
Note : PFAM: virulence-related outer membrane protein; KEGG: ent:Ent638_3136 virulence-related outer membrane protein

DNA sequence : 
ATGAAAAAAATAGTGTTATCGGCGTTATTGGCAAGTGGATTGCTCTGTGGACTGACCGCTCATGCAGGCATGAATACCTT
TTCTGTCGGGTATGCACAAAGCAAAATTCAGGGTCTGAAAAACATTGGCGGCGTTAATGTGCAATACCGCTATGAAGTGG
ACTCAGTGCTTAGCCTGATTGGTTCCTTTTCTTATCTTGATGGCGATGCTGACGTATCAAACCGTATTAGTGACGATGTG
ATCCGTAATCATGCCGACAGCAAATACTACTCGTTCCTGGTAGGCCCGGCTTATCGCATCAACCCCGTGGTCAGTGTATA
TGCGCTGATTGGTACCGCTCACGTTAAAACCGATGTCTCTTCCGAGTGGTTCAATTTCGAAAGCGGTAAAGGGTTAATCA
GCCAGGGGACGCAAAAGAGTACATTCTCATCGAACGCCTTCGCTTATGGTGCCGGGGTTATCATCAATCCGGTAGAAAAC
CTGTCTGTCAACCTAGGTTACGAAGGAACCAAAGCGGATATCAATGGCAATCGCGCCATCAACGGCTTTACTGTCGGTGT
TGGCTATCGATTCTGA

Protein sequence : 
MKKIVLSALLASGLLCGLTAHAGMNTFSVGYAQSKIQGLKNIGGVNVQYRYEVDSVLSLIGSFSYLDGDADVSNRISDDV
IRNHADSKYYSFLVGPAYRINPVVSVYALIGTAHVKTDVSSEWFNFESGKGLISQGTQKSTFSSNAFAYGAGVIINPVEN
LSVNLGYEGTKADINGNRAINGFTVGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 1e-36 57
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 4e-36 56
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 1e-36 56
pagC AGI37340.1 PagC Virulence OI-122 Protein 9e-29 54
pagC AGI37347.1 PagC Virulence OI-122 Protein 9e-29 54
pagC AGI37348.1 PagC Virulence OI-122 Protein 5e-29 54
pagC AGI37341.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37349.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37351.1 PagC Virulence OI-122 Protein 6e-29 53
pagC AGI37352.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37337.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37342.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37344.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37346.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37343.1 PagC Virulence OI-122 Protein 8e-28 53
pagC AGI37350.1 PagC Virulence OI-122 Protein 4e-28 53
pagC AGI37353.1 PagC Virulence OI-122 Protein 8e-28 53
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 6e-26 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_0357 YP_003331959.1 virulence-like outer membrane protein VFG0442 Protein 2e-24 41