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Name : Dd586_3516 (Dd586_3516) Accession : YP_003335052.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4019165 - 4020586 bp Length : 1422 bp Strand : + Note : PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: dze:Dd1591_0626 type II secretion system protein E DNA sequence : ATGACACATCAGACACAACACCATGAATTACAATTGCTTTGTCGTCGTTATCACGCCCTACTACTGGATATAGACGAACA GACGATCTCTGTTGCCGTGGCCGGTTCGGTAACAGAAGATCTGATCGCTGCGCTGCGTTTCGCCAGTCACCGCCGCGTTC TGGTAGAACAATGGCCTGCCGCACGGCTGGAGCAACAACTCACGTCACCGCAAGCTCAAGAGGCTAACGCCTCTTATCAG GCTGATACCGCATCCCCCGAAGAACCCGATGATGCGCCAGTAGTCCAGTTCATTAACCAAACCCTGAAATTGGCTATCCA GCGCCGGGCCTCTGATATCCATCTGGAACCCTTATCAGCAGGTTATCGCGTCAGGCTGCGTATCGACGGGGTATTACATG AAATACCGACCAACCCGGATTTACCCGCAAACCGTATGGTTGCCCGTCTTAAGATTATGGGGAAACTAAATATTGCTGAA CGCCGTTTGCCACAAGACGGGCAATTCAGCCTCCGTCTGGAGCAATATACCTATTCGCTACGCATCGCCACGTTACCCGT TCAGGGCGGTGAGAAAGTCGTATTGAGAGTATTACAAACACAGCAACACGCTCTGGAACTGAGTGCGTTAGGCCTGCCCG ATTACGCGCTGCAACAATTCAAGCACACCCTCAGCCTGCCACAAGGCCTGATTTTGGTTACCGGCCCCACCGGTAGCGGC AAGACTTTCACACTGTACAGTGCTATCCGCTGGTTAAATGACACCAGCCGTAACATTTGCAGCGTAGAAGATCCGGTAGA AATTCCCTTGCCCGGCATCAATCAAACCGCTATCCACGCACAAAGTCAGTTGGACTTCGCCCGGGTATTACGTGCGCTAT TACGCCAGGATCCCGATGTAATCATGATTGGTGAAATCCGTGATGCTGAAACGGCAGAGATCGCCGTCAAAGCCGCACAA ACCGGTCATTTGGTGCTGTCCACCCTGCATACTAATTCGGCGCTGGATACGCTGATCCGGTTGGGGCATTTGGGCATCCC CGGCTATCTGGTGGCTGCGGCGCTCAAACTGGTTATTGCCCAAAGACTGGTGAGACGATTATGTCCGCACTGCCGCCAAT TGAGAGAAGACACCACCACCTTACCCCACTCGCTATGGCAAGGCCCGTTACGGCAATGGCAGGCAACCGGGTGTGAACAC TGTTTTTCTGGCTACTACGGCCGGGCCGCGATTTACGATCTACTACCGGTCACACCGGCACTTCAGCAGGCATTGTCTGG TGCCACATCATTAGCTGACCACAACCTGACACTCCCATTGCAACGGGAAACCCGCTTACTATCCGCAGGACTGGCACTGG TTCACGAAGGCGTCACGTCTTTGGAAGAAGTCTATCGCGTGATAGGCGATCACATTGAATAG Protein sequence : MTHQTQHHELQLLCRRYHALLLDIDEQTISVAVAGSVTEDLIAALRFASHRRVLVEQWPAARLEQQLTSPQAQEANASYQ ADTASPEEPDDAPVVQFINQTLKLAIQRRASDIHLEPLSAGYRVRLRIDGVLHEIPTNPDLPANRMVARLKIMGKLNIAE RRLPQDGQFSLRLEQYTYSLRIATLPVQGGEKVVLRVLQTQQHALELSALGLPDYALQQFKHTLSLPQGLILVTGPTGSG KTFTLYSAIRWLNDTSRNICSVEDPVEIPLPGINQTAIHAQSQLDFARVLRALLRQDPDVIMIGEIRDAETAEIAVKAAQ TGHLVLSTLHTNSALDTLIRLGHLGIPGYLVAAALKLVIAQRLVRRLCPHCRQLREDTTTLPHSLWQGPLRQWQATGCEH CFSGYYGRAAIYDLLPVTPALQQALSGATSLADHNLTLPLQRETRLLSAGLALVHEGVTSLEEVYRVIGDHIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-66 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-66 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd586_3516 | YP_003335052.1 | type II secretion system protein E | VFG2426 | Protein | 5e-76 | 48 |
| Dd586_3516 | YP_003335052.1 | type II secretion system protein E | VFG0112 | Protein | 1e-81 | 47 |
| Dd586_3516 | YP_003335052.1 | type II secretion system protein E | VFG2048 | Protein | 6e-68 | 45 |
| Dd586_3516 | YP_003335052.1 | type II secretion system protein E | VFG0182 | Protein | 6e-70 | 44 |
