Gene Information

Name : Dd586_3413 (Dd586_3413)
Accession : YP_003334952.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : type VI secretion system effector, Hcp1 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 3893269 - 3893748 bp
Length : 480 bp
Strand : +
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA1069 hypothetical protein

DNA sequence :
ATGGCAAATATTATTTATTTGAAGCTTACAGGTGAGAAGCAGGGGCTTATATCTGCCGGATGTTCGACTGCAGATTCTAT
CGGTAATAAATACCAGTCGGCACACGAAGACGAAATCTTCGTCTATGAACTGATAAATCAGGTAACAAGAGTAGATAATG
TCTCTTTACACCCTGTAGAAATCAGAAAGCCTGTAGATAAATCCACACCACTTCTGGCTCAGGCACTGAACGATAATGAA
AAGCTGAAATGTGAATTTCTCTTTTACCGGACTTCTCTATCTGGTGGTAATGAACTTTATTTCAAAGTTAAACTGAGCGA
TGCTGTCATTACGGATCTTCGCTTTTTTTATCCAAATTCATTAACGAATAATGAGATGCAGCCACAGGAGAATGTTTCTT
TCAAATTTGCATCAATAGAGTGGGAACACGTTGTTGCCCGTACCAGCTCTTATATATTATGGAATAATGTAGAGTACTGA

Protein sequence :
MANIIYLKLTGEKQGLISAGCSTADSIGNKYQSAHEDEIFVYELINQVTRVDNVSLHPVEIRKPVDKSTPLLAQALNDNE
KLKCEFLFYRTSLSGGNELYFKVKLSDAVITDLRFFYPNSLTNNEMQPQENVSFKFASIEWEHVVARTSSYILWNNVEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf23 AAO17189.1 Orf23 Not tested tcd island Protein 5e-37 50
aec32 YP_851413.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-35 50
aec32 AAQ96726.1 Aec32 Not tested AGI-1 Protein 1e-35 50
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 8e-22 43