Gene Information

Name : Dd586_3162 (Dd586_3162)
Accession : YP_003334703.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3600897 - 3603470 bp
Length : 2574 bp
Strand : -
Note : KEGG: dze:Dd1591_1004 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGCGTCTGGATCGTCTTACCAACAAATTCCAGCTTGCCCTCGCTGATGCCCAATCTCTCGCCCTCGGACGAGATCATCA
ATTCATTGAACCGTTGCATTTGATGAGCGCCCTTCTGAATCAGGAAGGGGGGACTGTCGGCCCGTTGCTGACAGCCGCCG
GTGCGAACGTCAGTCGCCTTAAAAATGAAATCGAGCAGGCAATCAGCCGTTTACCACAGGTGGAAGGCACCGATGGCGAT
GTTCAACCGTCCAGCGAGCTGGTACGGACGCTCAATATCTGCGACAAGCTGGCGCAGAAAAAGGGCGACACTTTCATTTC
TTCAGAATTATTTGTGCTGGCGGTATTTGAATCACGCGGGACCCTTGGCGATCTGCTAAAGAACGCTGGAGCCACACAAC
AGAACGTGACTCACGCAATCGAGCAGGTTCGTGGTGGGCAGCAAGTAAACGATCAGAGTGCGGAAGATCAGCGTCAGGCG
CTGAAAAAATTCACGATCGACCTTACCGAGCGAGCCGAGCAAGGCAAACTGGATCCGGTGATTGGCCGCGATGAGGAAAT
TCGCCGTACCATCCAGGTGTTACAACGAAGAACCAAGAACAACCCGGTTTTAATTGGTGAACCAGGCGTCGGTAAAACAG
CGATTGTCGAGGGACTGGCACAGCGTATCGTCAATGGTGAAGTCCCCGAAGGTTTGAAGAATAAACGTGTGCTGTCACTT
GACATGGGCGCACTGGTTGCCGGGGCCAAATACCGTGGTGAGTTTGAAGAGCGCCTAAAAGGCGTACTGAATGACCTGTC
TAAACAGGAAGGTAGCGTCATTCTCTTCATCGACGAGTTGCACACCATGGTGGGTGCTGGCAAGGCTGATGGTGCGATGG
ATGCCGGTAACATGCTGAAGCCAGCGTTAGCGCGTGGCGAGCTGCACTGTGTAGGGGCCACCACACTGGACGAGTACCGC
CAGTTTATTGAAAAAGATGCTGCGCTCGAACGTCGTTTCCAGAAGGTGTTTGTCGCGGAACCGACTGTTGAAGACACTAT
CGCGATTCTGCGTGGTCTGAAAGAGCGGTATGAGTTGCACCACCACGTGCAAATCACCGACCCTGCGATTGTCGCAGCGG
CTATGTTGTCGCATCGGTATATTTCAGACCGAAAATTACCGGATAAGGCTATCGACTTGATTGATGAGGCCGCCTCCAGT
ATCCGTATGCAGATTGACTCGAAACCAGAACCGTTGGACCGCCTTGATCGCCGGATTATTCAGTTAAAACTGGAACAACA
GGCCTTAAAGAAAGAGTCTGATGAGGCCAGCCTGAAACGTTTGGAGATCCTCAATAGTGAACTTGAGCAGAAAGAGCGCG
AATACTCGAAACTGGAAGAAGAGTGGAAAGCGGAAAAAGCGTCGTTAACCGGCACGCAAAATATTAAAGCAGCGCTGGAA
CAGGCCAAAATCTCTTTGGAGCAGGCAAGACGCCAGGGGGATTTAGGGCGAATGTCCGAACTGCAGTATGGCAAAATCCC
TGAACTGGAAAAACAGCTGGCGGCAGCCACGCAGGCTGAAGGTAAAACCATGCATCTGCTGCGCAATCGCGTAACCGATG
CCGAGATTGCCGAGGTACTGGCCCGCTGGACCGGGATTCCAGTTTCACGGATGCTGGAAAGTGAACGGGAAAAACTGCTG
CGTATGGAGCAAGAGCTACATCAGCGGGTCATTGGACAGAATGAAGCGGTGGAGGCCGTCGCTAACTCGATTCGTCGTAG
CCGTGCCGGGTTGTCGGATCCCAATCGTCCTATCGGTTCATTTTTATTTCTCGGCCCGACCGGTGTGGGTAAAACCGAGT
TATGCAAAACACTGGCGTCATTCTTGTTCGATAGTGATGACGCGATGGTGCGTATTGATATGTCCGAGTTTATGGAAAAG
CATTCGGTTTCTCGGTTGGTCGGTGCTCCTCCAGGATATGTTGGCTATGAAGAGGGCGGATATCTGACCGAAGCGGTACG
CCGTCGGCCTTATTCGGTTATCTTGCTGGATGAAGTGGAAAAAGCGCATCCTGATGTGTTTAACATTCTGCTTCAGGTGT
TGGATGATGGGCGCCTGACCGACGGGCAAGGCCGTACGGTAGATTTCCGCAATACGGTAGTGATCATGACGTCTAACCTT
GGGTCAGACCTCATTCAGGAACGATTCGGCGAAATGAATTATGCTCAGATGCGTGACATGGTGTTAGGCGTTGTCAGCCA
TCATTTCCGCCCTGAGTTCATCAACCGTATTGATGAGGTCGTGGTGTTCCATCCATTGGGACAAGCCCATATTACCTCGA
TTGCTCAGATCCAATTGCAGCGTCTTTATAAACGTATGGAAGAGCGGGGTTATACCGTGTCTATCTCCGATGCTGCGCTG
GAGTTACTTGGTAAGTCAGGGTTTGACCCCGTCTACGGTGCACGTCCGCTGAAGCGAGCTATTCAGCAGATGATTGAGAA
CCCTCTGGCACAGCAAATATTGTCTGGGGCTTTGGTACCCGGAAAAGCGGTGACGCTGGATGTGGAAAACGACACCATCG
TTGCCCGACAATAG

Protein sequence :
MRLDRLTNKFQLALADAQSLALGRDHQFIEPLHLMSALLNQEGGTVGPLLTAAGANVSRLKNEIEQAISRLPQVEGTDGD
VQPSSELVRTLNICDKLAQKKGDTFISSELFVLAVFESRGTLGDLLKNAGATQQNVTHAIEQVRGGQQVNDQSAEDQRQA
LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL
DMGALVAGAKYRGEFEERLKGVLNDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR
QFIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLIDEAASS
IRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEILNSELEQKEREYSKLEEEWKAEKASLTGTQNIKAALE
QAKISLEQARRQGDLGRMSELQYGKIPELEKQLAAATQAEGKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREKLL
RMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGEMNYAQMRDMVLGVVSHHFRPEFINRIDEVVVFHPLGQAHITSIAQIQLQRLYKRMEERGYTVSISDAAL
ELLGKSGFDPVYGARPLKRAIQQMIENPLAQQILSGALVPGKAVTLDVENDTIVARQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-97 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_3162 YP_003334703.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-104 42