Gene Information

Name : Dd586_2892 (Dd586_2892)
Accession : YP_003334432.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3264946 - 3265767 bp
Length : 822 bp
Strand : +
Note : PFAM: protein of unknown function DUF932; KEGG: ebw:BWG_0234 CP4-6 prophage; hypothetical protein

DNA sequence :
ATGACCCGTCTGGCCTCGCGCTTTGGCGCAACAAATCTTATCCGCCGTGACCGCCCGCTGACCCGTGAAGAGCTGCTCCG
CACGGTACCGAGTGTGTTCAGCGAAGACAAACATGCTTCACGCAGTGACCGTTACACATACATCCCGACCATCACCCTGC
TGGATAACCTGCAACAGGAAGGTTTTCGTCCCTTTTTTGCCTGCCAGACGCGGGTACGGGATGAAGGCAAACGTGAGCAC
ACAAAACATATGCTGCGCCTGCGCCGTGAAGGGCACATCACCGGCCATCAGGTGCCGGAAATTATCCTGCTCAACAGCCA
TGACGGCTCCAGCTCGTATCAGATGCTGCCGGGACTTTTCCGGGCTGTCTGCCAGAACGGCCTTATCTGCGGCGAATCGT
TCGGGGAGGTGCGTGTTCCGCACAAGGGGGATGTGGTGGGCAAAGTCATCGAAGGGGCGTATGAGGTGCTGGGCATTTTT
GACCGGGTGGAAGAAAAGCGCGAGGCGATGCAGTCGCTGTTGCTGCTGCCCCCGGCACAGGAAGCTCTGGCCCGGGCGGC
CATCACCTACCGCTTTGGTGAAGACCACCAGCCGGTGACCGAAGCGCAGGTGCTGTCCCCCCGTCGCTGGCAGGATGAAA
GCAGCGACCTGTGGACGACGTACCAGCGGGTGCAGGAGAACCTGATTAAGGGCGGGTTATACGGACGCAATACAAAAGGG
AACCGCATGCACACCCGGGCCGTGAAGGGTATCGACGGTGACGTGAAGCTCAACCGGGCACTGTGGGTAATGGCGGAAAC
ACTGCTGGAAAAACTGGGCTGA

Protein sequence :
MTRLASRFGATNLIRRDRPLTREELLRTVPSVFSEDKHASRSDRYTYIPTITLLDNLQQEGFRPFFACQTRVRDEGKREH
TKHMLRLRREGHITGHQVPEIILLNSHDGSSSYQMLPGLFRAVCQNGLICGESFGEVRVPHKGDVVGKVIEGAYEVLGIF
DRVEEKREAMQSLLLLPPAQEALARAAITYRFGEDHQPVTEAQVLSPRRWQDESSDLWTTYQRVQENLIKGGLYGRNTKG
NRMHTRAVKGIDGDVKLNRALWVMAETLLEKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-92 72
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-92 72
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 7e-93 72
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 7e-93 72
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 9e-93 72
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 7e-93 72
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-96 72
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-96 72
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 8e-93 71
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-92 71
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-92 71
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-94 71
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-95 71
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 3e-96 71
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-92 71
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-72 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 6e-75 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2892 YP_003334432.1 hypothetical protein VFG1676 Protein 5e-93 71
Dd586_2892 YP_003334432.1 hypothetical protein VFG1526 Protein 1e-95 71
Dd586_2892 YP_003334432.1 hypothetical protein VFG0658 Protein 5e-93 71
Dd586_2892 YP_003334432.1 hypothetical protein VFG1615 Protein 1e-94 71