Gene Information

Name : Dd586_2891 (Dd586_2891)
Accession : YP_003334431.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : GTP-binding protein HSR1-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 3263987 - 3264862 bp
Length : 876 bp
Strand : +
Note : PFAM: GTP-binding protein HSR1-related; KEGG: ecl:EcolC_3433 GTP-binding protein HSR1-related

DNA sequence : 
ATGCAAGAAAACAATGGCTTTACCGTTATTGAACATTCCCTGTCCGCTCTTCCTGTCACCATACGCAGACATATCCTGAA
CCACATCCGCAAGCTCACCGATTACGAACCCGTCATCGGTATCATCGGTAAAACCGGTGCGGGGAAATCGTCGCTGTGCA
ATGCCCTTTTTAAGGGTGACGTTTCGGCGGTCAGCGATGTCTCGGCCTGTACCCGTGAACCGTTGCGGCTCCGGATTTCA
GTCGGACGGCACAGCCTCACGCTGGTGGATTTGCCCGGTGTCGGGGAAAGCCTCACCCGTGACCGGGAATACCGGCAACT
CTATCAGGAGTGGCTCCCCAGGCTGGACCTGGTCCTCTGGGTGATAAAAGCCGATGACCGGGCGCTCTCCATTGATGAGC
AATTCTACCGTCAGGTGATTGGTGAAGCACACCGGCACAAGGTGCTGTTTGTGGTTAACCAGGCCGATAAAATTGAACCC
TGTCATGAATGGGACTCGCTCACAGGGAGTCCGTCCGCGATGCAGTACCTCAATATCCAGAGCAGACTTATCGATATCGG
TAAGCTGTTTTCCCCTGCAGCACCAGTGGTGGCCATCTCCGCCCGGACCGGATGGGGACTGACCGCGATGGCGGAAGCCA
TGATGAAACATTTACCGGCACAGGCGGGCAGTCCTGTATCCACGCAACTACGTGAGGAGGTTCGTACTGAGCAGGTAAAG
TCCCGGGCCCGGTACGGGTTCGGTGAGGCGGTGGGACGCTCACTGGACACAGTGGCCGAAGGCCCCTTTACTCCTGCCCC
TGTCAGCACACTGATACGCTGTGTCCGCGATGCGGTCGTGTCTGTGGCCCGCGCCGTGTGGGATTTTTTCTTCTGA

Protein sequence : 
MQENNGFTVIEHSLSALPVTIRRHILNHIRKLTDYEPVIGIIGKTGAGKSSLCNALFKGDVSAVSDVSACTREPLRLRIS
VGRHSLTLVDLPGVGESLTRDREYRQLYQEWLPRLDLVLWVIKADDRALSIDEQFYRQVIGEAHRHKVLFVVNQADKIEP
CHEWDSLTGSPSAMQYLNIQSRLIDIGKLFSPAAPVVAISARTGWGLTAMAEAMMKHLPAQAGSPVSTQLREEVRTEQVK
SRARYGFGEAVGRSLDTVAEGPFTPAPVSTLIRCVRDAVVSVARAVWDFFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 1e-64 57
unnamed AAL99256.1 unknown Not tested LEE Protein 2e-64 57
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 3e-65 56
unnamed AAL08471.1 unknown Not tested SRL Protein 5e-65 56
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 3e-64 56
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 5e-64 56
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 3e-65 55
Z1210 NP_286745.1 histone Not tested TAI Protein 1e-62 55
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 1e-62 55
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 1e-64 54
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 1e-64 54
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 1e-64 54
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-63 53
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-50 42
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 8e-50 42
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-50 42
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 3e-50 42
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-50 42
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 1e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2891 YP_003334431.1 GTP-binding protein HSR1-like protein VFG0654 Protein 2e-64 56
Dd586_2891 YP_003334431.1 GTP-binding protein HSR1-like protein VFG1062 Protein 3e-65 56
Dd586_2891 YP_003334431.1 GTP-binding protein HSR1-like protein VFG1674 Protein 2e-65 55
Dd586_2891 YP_003334431.1 GTP-binding protein HSR1-like protein VFG1522 Protein 5e-50 42
Dd586_2891 YP_003334431.1 GTP-binding protein HSR1-like protein VFG1612 Protein 8e-50 41