Gene Information

Name : Dd586_2873 (Dd586_2873)
Accession : YP_003334415.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 3249900 - 3250295 bp
Length : 396 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: kpn:KPN_pKPN3p05962 hypothetical protein

DNA sequence :
ATGTTTAACACCCGTCAGAATAACAAGATGGTTGAAGTGTTATCGGGACCTGAGCGGCGTCGGCGTCGTACACCGCAGGA
AAAAATTGCCATTATTCAGCAGACTATGGAACCCGGTATGACCGTGTCTCATGTCGCCCGCCTGCATGGCATCAATCCTA
ATCAGATTTTCAAATGGCGCAGGCAATATGAAGACGGTTCCCTGACTGCCGTGGCTTCTGGCCAAGAGGTCGTACCCGCC
TCTGAACTTGCTGCGGCTAATAAGCAAATCCGCGAGCTCCAGCGCCTTCTGGGCAAAAAGACGATGGAAGCCGAAATACT
GAAAGAGACCGTGGAGTTCGGTCGGGCAAAAAAATGGATTGCGCATGCGCCCTTGTTGCACGGGGACGACGACTAA

Protein sequence :
MFNTRQNNKMVEVLSGPERRRRRTPQEKIAIIQQTMEPGMTVSHVARLHGINPNQIFKWRRQYEDGSLTAVASGQEVVPA
SELAAANKQIRELQRLLGKKTMEAEILKETVEFGRAKKWIAHAPLLHGDDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-42 75
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 9e-43 75
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 9e-43 75
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 9e-43 75
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 1e-42 75
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 1e-42 75
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 4e-42 74
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-33 73
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 1e-33 73
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-34 73
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 9e-43 71
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 4e-43 71
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 3e-42 70
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 3e-42 70
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 2e-29 66
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 2e-29 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2873 YP_003334415.1 transposase IS3/IS911 family protein VFG0648 Protein 3e-43 71
Dd586_2873 YP_003334415.1 transposase IS3/IS911 family protein VFG0622 Protein 8e-43 70
Dd586_2873 YP_003334415.1 transposase IS3/IS911 family protein VFG0609 Protein 8e-43 70
Dd586_2873 YP_003334415.1 transposase IS3/IS911 family protein VFG1733 Protein 6e-30 61