Gene Information

Name : Dd586_2861 (Dd586_2861)
Accession : YP_003334405.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 3237057 - 3237398 bp
Length : 342 bp
Strand : +
Note : PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: ent:Ent638_1078 AraC family transcriptional regulator

DNA sequence : 
ATGATTAAACTCGAGGAACTGATTACTGAAATTATCCAATGGATAGATGACAATATCCACCAGCAATTAAGCATTGATGA
TGTTGCTGCACGTTCTGGATACTCCAAATGGCATCTTCAGCGTGTTTTCTTTCAGAAAAATGGTAAAAACATTGCGGCGT
ATATTAGGGATAAAAAGCTGGCTCTGGCGGCATACGACCTCGTCGAAAGCAAGGACAGAGTTCTGGATATCGGTTTCCGG
TACGGTTTTGATTCCCAGCAGTCCTTCACCCGATCATTCTCAAAAAAATACAGTATTCCACCTCAGAAATATCGTCGACT
GTATACCGGAAAATATTTTTAA

Protein sequence : 
MIKLEELITEIIQWIDDNIHQQLSIDDVAARSGYSKWHLQRVFFQKNGKNIAAYIRDKKLALAAYDLVESKDRVLDIGFR
YGFDSQQSFTRSFSKKYSIPPQKYRRLYTGKYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 9e-19 44
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 9e-19 44
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 1e-25 50
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 7e-22 48
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 1e-21 47
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator BAC0560 Protein 8e-22 47
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 8e-22 47
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 9e-22 47
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 7e-22 47
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 4e-19 44
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 1e-18 42
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 8e-19 42
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator BAC0371 Protein 1e-18 42
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 3e-18 42
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 3e-18 42
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator VFG1038 Protein 4e-19 44
Dd586_2861 YP_003334405.1 AraC family transcriptional regulator VFG0585 Protein 7e-19 42