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Name : Dd586_2834 (Dd586_2834) Accession : YP_003334379.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3204263 - 3205759 bp Length : 1497 bp Strand : - Note : KEGG: dze:Dd1591_1300 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGAGCGCTCAGCCCGCCCACACGTCTGAATTACGACCTGTACTGCCGTTTGCGTTTGCCCGGTCACAGCAAATTCTGTT GCTGCAAGATGAGTCGGCAACCGTCGCAGAGGCGGTTTGTGTACCCGGCACCTCAGCACTGGCGTTACTGGAAGCTCGCC GGGTCGCCGGGGTGGCGTTGGCAGTGAGCCAGGTCAGTCCGGAAGAGTTTGAGCGGCAACTGGTTATGCGTTATCAGCGC GATTCTGAAGAAGCGCGACGCCTGATGGAAGACATCGGTAACGATATCGATTTCTACACGTTGGCCGAAGAGTTGCCGGA CAGCGATGACTTACTCGATGCCGACGACGACGCACCGATTATTCGGTTGATCAACGCCATGCTCACGGAGGCCATCAAAC ACAAGGCGTCGGATATTCACATCGAAACCTTTGAGCGCCACCTGCTGATCCGCTTTCGTATTGATGGTGTGTTGCGGGAG ATTTTGCGCCCGCAACGCCAACTGGCGTCATTACTGGTATCGCGTATCAAAGTCATGGCCAAGCTGGATATTGCCGAAAA GCGCGTCCCGCAGGATGGCCGTATGGCATTGCGTATTGGCGGCCGTGCCATTGATGTGCGTGTCTCGACCCTGCCTTCTA ACTATGGCGAGCGCGTGGTGCTGCGTTTGCTCGATAAAAACAGCGTCCGACTGGATCTGGAAACGTTGGGGATGGCCGAG CACAACCGTCGCCAGTTGGATACGCTGATCCACCGTCCACACGGCATCATTCTGGTTACCGGCCCTACCGGCTCGGGAAA AAGTACCACCCTGTATGCCGCCTTGAGCCGACTCAACTCTGCCGAACGCAACATCATGACGGTGGAAGACCCGATTGAAT ATGAACTGGAAGGCATTGGTCAGACTCAGGTGAACCCCAAGGTTGATATGACGTTCGCCCGTGGTTTGCGCGCTATTTTG CGTCAGGACCCGGACGTGGTGCTGGTGGGGGAAATTCGTGACGGTGAAACGGCACAAATTGCGGTGCAAGCGTCACTAAC CGGTCATCTGGTGTTATCCACCTTGCATACCAATAGCGCGCTGGGGGCGTTGTCCCGCTTGCAGGATATGGGGATCGAAC CGTTTCTGCTGTCAACGTCGTTACTGGGCGTGCTGGCGCAGCGGCTGGTGCGCACACTCTGCCCGTCATGCCGTCAGCCG TATAACGTCGATGAGGAACAGGCAAAACAGACCGGGCTGGCGGTGGGAACCACGCTGTACCATCCCGGTGGTTGCGAGAA GTGTAGCTACAGTGGTTATCGCGGTCGTACCGGTATCCATGAGCTGTTGCTGATTGATGATACGGTGCGCACGGCGATCC ATCGCGGCGAAAGTGAATTGGGGATTGCCCGGATGCTGGGCGATGAGCGAATCACGATTCGTCAGGATGGGATGGATAAA GTGCTGGCGGGCATCACCACCTGGGAAGAAGTGGTGCGTGTAACGAAAGAGGAATGA Protein sequence : MSAQPAHTSELRPVLPFAFARSQQILLLQDESATVAEAVCVPGTSALALLEARRVAGVALAVSQVSPEEFERQLVMRYQR DSEEARRLMEDIGNDIDFYTLAEELPDSDDLLDADDDAPIIRLINAMLTEAIKHKASDIHIETFERHLLIRFRIDGVLRE ILRPQRQLASLLVSRIKVMAKLDIAEKRVPQDGRMALRIGGRAIDVRVSTLPSNYGERVVLRLLDKNSVRLDLETLGMAE HNRRQLDTLIHRPHGIILVTGPTGSGKSTTLYAALSRLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTFARGLRAIL RQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGIEPFLLSTSLLGVLAQRLVRTLCPSCRQP YNVDEEQAKQTGLAVGTTLYHPGGCEKCSYSGYRGRTGIHELLLIDDTVRTAIHRGESELGIARMLGDERITIRQDGMDK VLAGITTWEEVVRVTKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-134 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-134 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd586_2834 | YP_003334379.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-134 | 63 |
| Dd586_2834 | YP_003334379.1 | general secretory pathway protein E | VFG0182 | Protein | 3e-133 | 61 |
| Dd586_2834 | YP_003334379.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-121 | 56 |
| Dd586_2834 | YP_003334379.1 | general secretory pathway protein E | VFG2426 | Protein | 7e-75 | 47 |
