Gene Information

Name : Dd586_2810 (Dd586_2810)
Accession : YP_003334355.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3172945 - 3173982 bp
Length : 1038 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: dze:Dd1591_1326 transport system permease protein

DNA sequence :
ATGCGTTCATCTCTTTGTAGTCAGGCAACCGTCCTGCCGTACACACTGTCATCGTTAACCGGGCGTCGGCTTGGTGGCGT
ACTGCCTTGTCTGCTGTTGCTAGCTTTGGTGTGTCTCGCCAGCCTGATGCTGGGTGCCCGCGCCATCGCGCCGGAGGTCG
TCTGGCAGAGTCTGGCCGGTCATACACAAGGTCCGGACAGCATCATCGTTTTACAGGCGCGGCTGCCGCGCACACTGGCC
GGTATTCTGGTGGGCATGGCGCTCGGTGCCTCCGGTGCGGTGATGCAGGCGCTGACCCGCAACCCGCTGGCCGACCCCGG
CATCCTCGGCGTTAACGCCGGAGCCAGTTTCGCCATCGTGCTCGGCATCAGCGTATTCGGGATTACCGGTATGGCGTCGT
GGCTGGGGTTTGCCTGGCTCGGCGTGTTGGCAGCCAGCCTGATGGTGTGGATCATCGGTACACTGAGCGGCGGTCGGGTT
AATCCAATACGCCTGACGCTGGCCGGTGTGGCGCTGAGCGCCGTGTTGTCGGGGTTTACCTCATCACTGTCGCTGCTCAA
TCCACACGCCTTTGATCAGTTGCGTCTGTGGGAAGCCGGTACGCTGGATATCCGTTCGCTGAGCAACATTGCCTGGGTCA
CGCCCATCGTACTGCTGGGCTGCGCACTGGCTTTTTTGGCCGCTCGTTCATTGAATACGCTTAGTATGGGGGATGACCTC
GCGACGGCACTCGGCACCCGTGTGGGGGTCATTCGTGTGATGGCGATGCTGTCGGTGATGCTGTTGTGTGGCTCCGCTAC
CGCGCTGACCGGCCCGATTGGCTTTGTCGGCCTGATGATCCCCCATATCGCTCGCGGCTGGGCCGGTCCGGATCAACGCT
GGATTCTGCTCTATTCCCTGCTGTTCGCCCCCATACTGTTGCTCTGCGCTGATATTGTCGGCCGCCTGTTGGTAGCGGGT
GAATTGCGGGTTTCTATTGTCACCGCCTTTATCGGTGCGCCGGTGCTGATCTGGCTGGTACGCCAGCGCAAGTTTTAG

Protein sequence :
MRSSLCSQATVLPYTLSSLTGRRLGGVLPCLLLLALVCLASLMLGARAIAPEVVWQSLAGHTQGPDSIIVLQARLPRTLA
GILVGMALGASGAVMQALTRNPLADPGILGVNAGASFAIVLGISVFGITGMASWLGFAWLGVLAASLMVWIIGTLSGGRV
NPIRLTLAGVALSAVLSGFTSSLSLLNPHAFDQLRLWEAGTLDIRSLSNIAWVTPIVLLGCALAFLAARSLNTLSMGDDL
ATALGTRVGVIRVMAMLSVMLLCGSATALTGPIGFVGLMIPHIARGWAGPDQRWILLYSLLFAPILLLCADIVGRLLVAG
ELRVSIVTAFIGAPVLIWLVRQRKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 8e-42 45
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 8e-42 45
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 8e-42 45
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 8e-42 45
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 8e-43 43
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 9e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2810 YP_003334355.1 transporter permease VFG0926 Protein 2e-64 58