Gene Information

Name : Dd586_0272 (Dd586_0272)
Accession : YP_003331874.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 317809 - 318753 bp
Length : 945 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dze:Dd1591_3828 transcriptional regulator, LysR family

DNA sequence :
ATGGAACGATTAAAGAGTATGTCAGTGTTCGCCAGCGTGGTGGAATTCGGCTCATTTACCGCCGCCGCACGCCAGTTGGC
GATGAGCGTCTCCGCCGTCAGTCAGACGGTGACCCGGCTGGAAGATGAACTACAGGTGAAACTGCTCAACCGCAGCACCC
GTAGCATCGGGCTGACGGAAGCTGGCAGGATCTATTACCACGGCTGTCGCCGTATGCTGCACGAAGCCCACGAAGTGCAT
GAGCAGTTATATGCGTTCAACAATACGCCAATCGGTACCTTGCGCATCGGCAGTTCCTCCACCATGGCGCAAAACGTACT
GGCCACAATGACCACCGACATGCTAAAGGAATACCCGGGATTATCGGTTAATCTGGTGTGTGGGATCCCAGCACCAGACC
TGATTGCTGATGGGCTGGATATCGTTATTCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTATAGCACCCGCCTGGGTTCG
ATGCCCATGGTGGTGTGTGCCGCCAAAAGCTATCTGGCGCAGCATACCACGCCGGAAAAGCCCGGTGATGTAAGCAACGC
GTCCTGGCTCGAATACAGCGTTCGCCCGGACAGCGAATTCGAACTGATCGCCCCGGAAGGCATCACCACCCGACTGACGC
CGCAAGGGCGCTTCGTCACCAATGACCCGGTTACGCTGATTCGCTGGCTGAAAAACGGCGCTGGCATCGCTTATGTGCCG
TTAATGTGGGTATTTGAAGAGATCAAACGTGGAGAGATAGAGATCCTCTTTTCGCGCTACCACTCCGATCCACGCCCGGT
ATACGCGCTTTATACCCGCCGCGACAACCTGCCGCTAAAAGTACAGGTGTGCATCAACTACCTGACTGAGTACTTCAACA
AGGTGGCGCTGATTTATCAGGGATACCGACAGGAGCACCCACAAACCGGGCTACCGCAGAAATAA

Protein sequence :
MERLKSMSVFASVVEFGSFTAAARQLAMSVSAVSQTVTRLEDELQVKLLNRSTRSIGLTEAGRIYYHGCRRMLHEAHEVH
EQLYAFNNTPIGTLRIGSSSTMAQNVLATMTTDMLKEYPGLSVNLVCGIPAPDLIADGLDIVIRVGALQDSSLYSTRLGS
MPMVVCAAKSYLAQHTTPEKPGDVSNASWLEYSVRPDSEFELIAPEGITTRLTPQGRFVTNDPVTLIRWLKNGAGIAYVP
LMWVFEEIKRGEIEILFSRYHSDPRPVYALYTRRDNLPLKVQVCINYLTEYFNKVALIYQGYRQEHPQTGLPQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 3e-125 84