Gene Information

Name : Dd586_2664 (Dd586_2664)
Accession : YP_003334211.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Resistance
Product : Lytic transglycosylase catalytic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2997519 - 2998226 bp
Length : 708 bp
Strand : +
Note : PFAM: Lytic transglycosylase catalytic; KEGG: cko:CKO_00898 hypothetical protein

DNA sequence :
ATGCTTTCCACCACTGCCTTTCTGGCGGCGGCCATGCAGTGTGCCGCCAGCATTCATCCGTCCACTGCACTCGACGTGGC
ACGGGTGGAATCCGGTTTTAACCCTTATGCCATCGCCGAAATTATTCCGAAGGCCACTCGCTCCCTCGGAGATAACAATG
TTATCTCCCATCAGCCCGCCAGCCGGGAAAAAGCTGAGCATATTATTCGCCGCCTTATGGCACAGGGACGCCGTTACTCT
GTGGGGCTGATGCAAATCACCAGCACCAATTTCCATCATTACGGCGTGACGGCCTCTGACCTGCTTGATCCCTGCACCAA
TTTGTCCGTTTTTGAACGCATTCTCAGCGACTGCTACCAACGTGGCGGTTCCCTGAAAAGGGCGCTGAGCTGCTATTACT
CCGGCAATTTCCGTACCGGACAACAACCTGAAGCGGCATTTTCCGGGACCAGCTACGTGCAGCGGATAGGTTATGTTTCG
GCATCTCCCCGTTATGCCGTACCGGGCACCCGCGCGGATAAATCCACAACGCCGACTCCCCTCGAAGCCATCCCTGTTGA
TAAGCCATCCCCTCCCCGTCTGATCTGGCCGGGGACCGTTGTTCGGGGCGTCCCCGCAAAACTCCGTCAGGGGAAAACCG
CCATCGCACAAACCTCCGCGCCGTCAGTGCGCCGGAGCCTCTCCCAGTCACCCCGTGAGGAAGAATAA

Protein sequence :
MLSTTAFLAAAMQCAASIHPSTALDVARVESGFNPYAIAEIIPKATRSLGDNNVISHQPASREKAEHIIRRLMAQGRRYS
VGLMQITSTNFHHYGVTASDLLDPCTNLSVFERILSDCYQRGGSLKRALSCYYSGNFRTGQQPEAAFSGTSYVQRIGYVS
ASPRYAVPGTRADKSTTPTPLEAIPVDKPSPPRLIWPGTVVRGVPAKLRQGKTAIAQTSAPSVRRSLSQSPREEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70283.1 Pilx1/VirB1-like protein Not tested HPI Protein 5e-86 78

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2664 YP_003334211.1 Lytic transglycosylase catalytic BAC0396 Protein 1e-50 51