Gene Information

Name : Dd586_2575 (Dd586_2575)
Accession : YP_003334126.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2900831 - 2901676 bp
Length : 846 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dze:Dd1591_2667 ABC transporter related

DNA sequence : 
ATGACCGCCATTACCAGCCGGGAGCTGACCCTCGGCTATGCCAGCCAGACGATTATCGACAATCTGGATATACAGTTGCC
GAAGGGCAAAGTGTCGGTACTGATAGGCAGCAACGGGTGCGGCAAAAGCACACTGCTTAAGTCTTTCGCCCGTTTGCTTA
AACCACTGAGTGGCTCGGTCATCCTCAATGGTGAGGATATTCACCGTCAGTCGACCGCCGAGGTGGCGCGAGCGCTGGCG
ATTTTACCGCAGATGCCGGATGCGCCGGAAGGCATTACCGTGAAGCAGTTGGTCAGCCTGGGGCGCTATCCCTACCAGAA
CTGGTTACAGCAGTGGTCACAGGAAGACGAGCGGATGGTAAACCGTGCGCTGGTGCAAACCGGCACCGACGGGCTGGCGG
ACCGACCGGTAGATGCGTTATCCGGCGGTCAACGCCAACGGGTGTGGATCGCTATGACGCTGGCACAGGATACCGAGGTG
GTTCTGCTGGATGAACCCACCACCTTTCTCGACCTGGCGCACCAGATTGAAGTGCTGGATTTGCTGCGTGAGTTGAACCG
TCAACACGGGAAAACCATCATCATGGTACTGCACGATCTCAATCTGGCGTGCCGTTACGCCGACCATATGGTGGCGGTGC
ATAATCGCACCGCCTTCGCACAGGGAGCACCGGCGGAAATTCTGGACGAAGCGCTGGTGAAAACCGTGTTTAATCTGGAC
TGCCGTATTATTGCTGATCCGTTTTTCCACACACCGTTATGCATTCCATTTGGCCGTGAAAAACCGCATGAAATAGTAGC
AGACAGTGGCCCGTCGGATGACTGGCATGGGCAGGTGGCAGGATGA

Protein sequence : 
MTAITSRELTLGYASQTIIDNLDIQLPKGKVSVLIGSNGCGKSTLLKSFARLLKPLSGSVILNGEDIHRQSTAEVARALA
ILPQMPDAPEGITVKQLVSLGRYPYQNWLQQWSQEDERMVNRALVQTGTDGLADRPVDALSGGQRQRVWIAMTLAQDTEV
VLLDEPTTFLDLAHQIEVLDLLRELNRQHGKTIIMVLHDLNLACRYADHMVAVHNRTAFAQGAPAEILDEALVKTVFNLD
CRIIADPFFHTPLCIPFGREKPHEIVADSGPSDDWHGQVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-62 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-62 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-56 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-56 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-54 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-57 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-52 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2575 YP_003334126.1 ABC transporter BAC0164 Protein 8e-55 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2575 YP_003334126.1 ABC transporter VFG0925 Protein 9e-64 50
Dd586_2575 YP_003334126.1 ABC transporter VFG1042 Protein 8e-55 47