Gene Information

Name : Dd586_2411 (Dd586_2411)
Accession : YP_003333965.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2718514 - 2719797 bp
Length : 1284 bp
Strand : -
Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; KEGG: dze:Dd1591_2462 arsenical pump membrane protein

DNA sequence :
ATGGTACTGGCTGGAGCCGTTTTTATACTGACGCTGATCCTGGTCATCTGGCAACCTCGCGGGTTGGGGATTGGCTGGAG
CGCGTCGTTCGGGGCTGTGTTGGCCTGGGCTACCGGGGTGATTCACATAGACGATATTCCCGTGGTATGGCATATCGTCT
GGAATGCGACTATCACGTTTATTGCGATCATTATTATCAGCTTACTGCTCGATAAGTCCGGTTTTTTCGAGTGGGCCGCG
CTGCACATGGCACGCAAAGGACACGGGCGAGGCAAACGCCTGTTCTCCTTGATGATTGTGCTGGGGGCGCTGGTTGCTGC
ACTGTTCGCGAATGATGGTGCAGCACTGATCCTGACGCCGATTGTGGTGGCGATGTTGACCGCGCTGGGCTTTAGTCGTG
GCGCAACACTGGCCTTCGTGATGGCCGCCGGATTTATTGCCGATACCTCCAGCCTGCCGCTGGTGGTATCCAATCTGGTT
AATATCGTTACGGCGGATTATTTCCGCATCGGTTTCAATACCTATGCGCGGGTGATGATTCCAGTCAATATCGCCGCTGT
TGTTGCCACATTGGGCGTTTTGCATCTGTTTTTCCGCCGGGAGATTCCGGCCGATTACGATTTGGACAAACTGAAAGATC
CTGCTGCGGCTATTCGTGACAGGCAAACGTTTAAGGCAGGATGGTGGGTATTGGCACTGTTGTTAAGCGGCTTTTTTGTA
CTGGAGCCACATGGGGTGCCTGTCAGCGTGGTTGCGACGATTGCTGCCGTGATCCTCTGGCTGGTCGCCCGGCGAGGGAA
CGTGATTGATACCACCAGTGTACTGCGCGGCGCGCCCTGGCAGATTGTGGTGTTTTCACTGGGCATGTATCTGGTGGTAT
ATGGTCTGCGTAATGCCGGGCTGACTAATTACCTGTCCCATGTGCTGAATTATTTTGCTGCTCAAGGGCTGTGGATGGCG
ACGATAGGCACCGGTTTCCTCACGGCGGTGTTGTCATCGGTGATGAACAATATGCCGACGGTGCTCATCGGCGCATTGTC
GATTGATGCATCTGCGGCTAATGGTGTAATCCGTGAGGCCATGACGTACGCCAATATTATTGGCTGCGATTTAGGCCCCA
AACTGACTCCCATCGGCAGTCTTGCCACATTGCTGTGGCTGCATGTACTGGCGCAAAAAGATATCCGCATCAGTTGGGGA
TATTACTTCCGTGTTGGTGTGGTGATGACGTTGCCGGTGTTATTCGTGACGCTGGTAGCGTTGGCGCTACATCTTTCTAT
TTAA

Protein sequence :
MVLAGAVFILTLILVIWQPRGLGIGWSASFGAVLAWATGVIHIDDIPVVWHIVWNATITFIAIIIISLLLDKSGFFEWAA
LHMARKGHGRGKRLFSLMIVLGALVAALFANDGAALILTPIVVAMLTALGFSRGATLAFVMAAGFIADTSSLPLVVSNLV
NIVTADYFRIGFNTYARVMIPVNIAAVVATLGVLHLFFRREIPADYDLDKLKDPAAAIRDRQTFKAGWWVLALLLSGFFV
LEPHGVPVSVVATIAAVILWLVARRGNVIDTTSVLRGAPWQIVVFSLGMYLVVYGLRNAGLTNYLSHVLNYFAAQGLWMA
TIGTGFLTAVLSSVMNNMPTVLIGALSIDASAANGVIREAMTYANIIGCDLGPKLTPIGSLATLLWLHVLAQKDIRISWG
YYFRVGVVMTLPVLFVTLVALALHLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 4e-151 75
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-105 56
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-107 56
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-109 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_2411 YP_003333965.1 arsenical pump membrane protein BAC0031 Protein 3e-145 75
Dd586_2411 YP_003333965.1 arsenical pump membrane protein BAC0577 Protein 4e-146 75
Dd586_2411 YP_003333965.1 arsenical pump membrane protein BAC0578 Protein 1e-147 75
Dd586_2411 YP_003333965.1 arsenical pump membrane protein BAC0576 Protein 4e-148 75
Dd586_2411 YP_003333965.1 arsenical pump membrane protein BAC0574 Protein 5e-107 57
Dd586_2411 YP_003333965.1 arsenical pump membrane protein BAC0575 Protein 1e-109 56