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Name : Dd586_2155 (Dd586_2155) Accession : YP_003333714.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 2442877 - 2444799 bp Length : 1923 bp Strand : - Note : KEGG: dze:Dd1591_2208 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein DNA sequence : ATGCGACTGTTTATTGCGGAAAAACCCAGTCTTGCCAGAGCGATTGCCGATGTCTTGCCTAAACCGCACCGGCGGGGCGA TGGCTTCATTGCCTGTGGCGAACAGGATATGGTGACCTGGTGTGTGGGGCACCTGCTGGAACAGGCACAACCAGACGTTT ACGATGCCCGCTACGCGCGCTGGTCGCTGGCTGACTTGCCGATCGTGCCACAAAAATGGCTGCTCCAGCCACGTCCATCG GTAAGTAAGCAACTGAATGTGATCAAAAAACTGCTGACGCAGGCCGATGAAGTGATCCATGCCGGTGACCCGGACCGGGA AGGGCAGTTGCTGGTCGATGAGGTGCTGGAGTATCTGGCGCTGCCTGAAGCGAAACGCCAGCAGGTACGTCGTTGTCTTA TCAATGACCTGAACCCGCAAGCGGTGGAACGTGCAGTATCGCGCCTGCGTGAAAACCGGGAGTTTGTGCCGCTGTGTGTT TCCGCACTGGCACGTTCACGTGCTGACTGGTTATATGGCATTAATATGACCCGCGCCTATACCCTGCTCGGGAAGAATGC CGGGTATGAAGGCGTGTTGTCAGTCGGCCGGGTGCAGACGCCAGTATTGGGGCTGGTTGTCCGCCGTGATGAAGAGATAG ACAATTTTGTGTCGCGCGACTATTTCGAGGTTAAGGCCCATATCGTTACCGCCAACGAGCGGTTTATCGCGTTGTGGCAG CCAAGTGATTCGTGTGAGCCGTATCAGGACGAAGAAGGGCGTTTGCTGCATCGCCCGCTGGCTGAACACGTTGTTAAACG CATCGAAGGGCAGCCCGCACAGGTCACGGCCTATAATGATAAACGGGAATCGGAAACCGCACCGTTGCCGTATTCCCTTT CTACCTTGCAAATTGAAACGGCTAAACGCTTTGGTTTGAGCGCCCAACAAGTGCTGGATATTTGCCAGCGGTTGTATGAA ACGCACAAGTTGATTACCTACCCGCGTTCGGATTGCCGGTATCTGCCGGAAGAACATTTCGCCGGGCGACACGCAGTACT GAACGCGATTGCCGCACATCAGCCAGATTTATTGCCGCAGCCTGCGGCGGATCCTGAACGCCGCAATCGCTGCTGGGATG ACAGTAAGGTTGACGCACACCATGCCATTATCCCCACCGCACGTAGCGCCCGCACATCGTTGACCGAGCAGGAAAGTCAG GTTTATGGGTTGATTGCCCGGCAGTACCTGATGCAGTTTTGCGCTGATGCTGTCTTTCGTAAATGCGTTATTGAGCTGGA TATCGCCGGTGGCAAGTTTGTGGCGAAGGCCCGTTTTCTGGCAGAGGCGGGGTGGCGCACGTTGCTCGGTCATAAAGAAC GGGACGAGGAAAACGAGGGAATGCCGTTGCCGGTGGTGGCGAAAGGTGATGAGTTGTTGTGTGAGAGGGGGGAGGTGGTT GAGCGACAAACTCAGCCTCCCCGGCCGTTTACCGATGCGACTTTGCTATCCGCCATGACTGGGATTGCCCGCTTCGTGCA GGATAAGGCGCTGAAGAAGATCCTGCGTGAAACGGATGGTCTGGGTACCGAAGCCACGCGTGCAGGCATTATCGAACTGT TGTTTAAACGCGCGTTCCTGATAAAGAAAGGGCGGCATATCCATGCGACTGACGCGGGTAAGGCGTTGATCCATGCGTTA CCGCCGATCGCCGCGCACCCGGATATGACGGCACACTGGGAAGCCACGCTGACGCAAATTAGTGAAAAGCGTTGCCGCTA CCAGGATTTTATGCAGCCACTGACGCAGTCGTTGTACGAACTTATTCAGCAGGCACGACAAAGTGGTAATATCTCGGCAT TCAGAGGATTACCACCCGTTAAGCGCGCTTCGCCCGAGAAGCGCAAACGTCGTCAGTCACGTTCAGCCAGCACCAAGGAG TAA Protein sequence : MRLFIAEKPSLARAIADVLPKPHRRGDGFIACGEQDMVTWCVGHLLEQAQPDVYDARYARWSLADLPIVPQKWLLQPRPS VSKQLNVIKKLLTQADEVIHAGDPDREGQLLVDEVLEYLALPEAKRQQVRRCLINDLNPQAVERAVSRLRENREFVPLCV SALARSRADWLYGINMTRAYTLLGKNAGYEGVLSVGRVQTPVLGLVVRRDEEIDNFVSRDYFEVKAHIVTANERFIALWQ PSDSCEPYQDEEGRLLHRPLAEHVVKRIEGQPAQVTAYNDKRESETAPLPYSLSTLQIETAKRFGLSAQQVLDICQRLYE THKLITYPRSDCRYLPEEHFAGRHAVLNAIAAHQPDLLPQPAADPERRNRCWDDSKVDAHHAIIPTARSARTSLTEQESQ VYGLIARQYLMQFCADAVFRKCVIELDIAGGKFVAKARFLAEAGWRTLLGHKERDEENEGMPLPVVAKGDELLCERGEVV ERQTQPPRPFTDATLLSAMTGIARFVQDKALKKILRETDGLGTEATRAGIIELLFKRAFLIKKGRHIHATDAGKALIHAL PPIAAHPDMTAHWEATLTQISEKRCRYQDFMQPLTQSLYELIQQARQSGNISAFRGLPPVKRASPEKRKRRQSRSASTKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-110 | 41 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-110 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-110 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-106 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 4e-110 | 41 |
