Gene Information

Name : Dd586_1870 (Dd586_1870)
Accession : YP_003333435.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Resistance
Product : Cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 2119032 - 2120186 bp
Length : 1155 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: spe:Spro_1626 cystathionine gamma-synthase

DNA sequence :
ATGAGCCATTTCGACACCCTGACCGTTCACGCTGGCTACACCCCGGATAGCACCGGCGCAGTCATGCCAGCCATTTACGC
CACATCTACCTTTGCCCAGCCTGCTCCCGGCCAGCATACCGGTTACGAATACTCACGCAGCGGCAACCCGACCCGTCACG
CGCTGGAAGCCAACATCGCCGCGCTGGAAGGTGGTATTCAGGGCTTTGCCTTCGCCTCCGGACTGGCGGCCAGCGCTACC
GTGCTGGAACTGCTCGATCAGGGCAGCCACATCGTCGCGGTGGATGACATTTACGGCGGCACCTGGCGATTGCTGGATCG
GGTGCGCAAGCGCACCGCCGGGCTAACCGTCACCTATGTCGACCCGGCTGACCTGACCACGCTGGAGCAGGCGATCACCC
CGCAAACCCGGATGATCTGGGTGGAAACCCCCACCAACCCGCTGCTGAAACTGGCCGACCTGCGCGCCATCGCCGAGCTA
GCCCAGCGCCACGGCGTGATAAGCGTCGCGGACAACACCTTTGCCTCTCCGGCCTTGCAGCGCCCGCTGGAACTGGGCTT
TGATATCGTGGTGCACTCGGCCACCAAATATCTGAACGGCCACTCGGACGTGGTCGCCGGGCTGGCGGTGGTCGGGCGGG
ACAAGGAACTGGCAGCGCAACTGGCGTTTTTGCAAAATGCGGTGGGCGGGGTACTCGATCCGTTCAGCAGCTTCCTGACA
CTGCGCGGTATCCGCACACTGGCGCTGCGCCTGGCCCGCCATAGCGACAACGCGCTGACGCTGGCGCGCTGGCTGGAACA
ACAGCCGCAAGTGGAACAGGTGTACTACCCCGGCCTGCCGTCTCACCCGCAACATGCGCTGGCGCGTCAACAAATGAGTG
CGTTTGGCGGCATGATAAGCGTCAGGCTGCGCGGCGACGCCGAGTACGCCAGCACGGTGATTAAGCGCACCCGGCTGTTT
ACGCTGGCGGAAAGTCTGGGCGGCGTAGAAAGCCTGATCAGCCAACCCTTCAACATGACCCATGCCTCCTTGCCGCTGGA
ACAACGTCTGCACCTCGGTATCACGCCGCAGTTGCTGCGCCTGTCGGTCGGCATCGAAAATGTGGAAGACCTGATTGCCG
ATTTGCAACAGGCGTTAACCGGCCAGACGGCGTAA

Protein sequence :
MSHFDTLTVHAGYTPDSTGAVMPAIYATSTFAQPAPGQHTGYEYSRSGNPTRHALEANIAALEGGIQGFAFASGLAASAT
VLELLDQGSHIVAVDDIYGGTWRLLDRVRKRTAGLTVTYVDPADLTTLEQAITPQTRMIWVETPTNPLLKLADLRAIAEL
AQRHGVISVADNTFASPALQRPLELGFDIVVHSATKYLNGHSDVVAGLAVVGRDKELAAQLAFLQNAVGGVLDPFSSFLT
LRGIRTLALRLARHSDNALTLARWLEQQPQVEQVYYPGLPSHPQHALARQQMSAFGGMISVRLRGDAEYASTVIKRTRLF
TLAESLGGVESLISQPFNMTHASLPLEQRLHLGITPQLLRLSVGIENVEDLIADLQQALTGQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-76 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-75 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-57 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_1870 YP_003333435.1 Cystathionine gamma-lyase BAC0207 Protein 1e-67 46