Gene Information

Name : Dd586_1535 (Dd586_1535)
Accession : YP_003333108.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1729135 - 1730505 bp
Length : 1371 bp
Strand : -
Note : KEGG: dze:Dd1591_1573 ATPase, FliI/YscN family; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase

DNA sequence :
ATGACAGTGCGTCTCTCCCGTTGGCTTTCTTCCATTGATGCATTTGAAAAACGCATCACCAATACGCCTTCGATACGCCG
TTACGGACGGCTGACGCGGGCAACGGGATTGGTGCTTGAAGCAACTGGCCTGCATATGCCATTAGGCTCGACCTGTTTGA
TTGAACGGCAAACCGGCAATCAGGTTGACGAAGTTGAAAGTGAAGTCGTCGGATTTAATGGCCAGAAAATGTTCCTGATG
CCGCTTGAAGAAGTCGAAGGCATCATCCCAGGCGCTCGTGTCTACGAACGTGTTGGCCTGTCCGGCAGCAGCCAGGGCAA
GCAATTACCATTGGGCCCGGCACTGTTGGGACGAGTACTGGACGGTAGTGCCAAACCGCTGGATGGTCTGCCGACGCCAG
ATACCGGCTATAGCGCCCCGCTGATGACAGCGCCATTTAACCCTCTCCAGCGTACGCCGATCGAACATGTATTGGATGTC
GGTGTTCGGGCCATCAATGCCTTGCTGACCGTTGGTCGGGGTCAGCGCATGGGGCTTTTCGCTGGCTCCGGCGTGGGTAA
AAGTGTGCTACTCGGTATGATGGCGCGCTATACTCAAGCTGATGTGATTGTCGTTGGGTTAATCGGGGAGCGTGGGCGTG
AAGTCAAAGACTTCATTGAAAACATCCTCGGTACTGAAGGGCTCGCACGTTCAGTGGTGATCGCAGCTCCAGCGGACGTC
TCTCCCCTGCTGCGTATGCAGGGTGCGGCTTATGCTACACGTATCGCAGAAGATTTCCGCGATCGTGGACATCATGTATT
GTTAATTATGGATTCGCTGACGCGTTATGCGATGGCACAGCGTGAAATTGCGCTGGCAATCGGCGAGCCACCAGCAACCA
AAGGTTATCCGCCTTCAGTTTTCGCGAAACTGCCGGCACTGGTAGAACGTGCAGGTAACGGCATTTCAGGCGGCGGTTCG
ATCACCGCGTTTTATACGGTGTTGACCGAAGGTGACGATCAGCAAGATCCGATTGCTGACTCTGCCCGTGCGATTCTGGA
CGGCCACATTGTGTTGTCCCGTCAGTTGGCAGAATCTGGGCATTATCCGGCTATTGATATTGAAGCGTCGATTAGCCGTG
CTATGACAGCATTGATCGATGAGAACCATTATTCTGCGGTGAGGCAGTTCAAACAATCGTTATCCAGTTACCAACGCAAT
CGCGACCTGATTAATGTTGGCGCCTATGCCGCTGGTAGCGACCCGATGCTTGATCGGGCAATACAGCTGTATCCGCAAAT
GCAACATTTTTTGCAGCAGGGAATGTTTGAGCGCAGTTCGTTTGATGAAGCCTGTCAGGCACTCAATAACATTTTCCCGT
ATAATAGATAG

Protein sequence :
MTVRLSRWLSSIDAFEKRITNTPSIRRYGRLTRATGLVLEATGLHMPLGSTCLIERQTGNQVDEVESEVVGFNGQKMFLM
PLEEVEGIIPGARVYERVGLSGSSQGKQLPLGPALLGRVLDGSAKPLDGLPTPDTGYSAPLMTAPFNPLQRTPIEHVLDV
GVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSVVIAAPADV
SPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGS
ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRN
RDLINVGAYAAGSDPMLDRAIQLYPQMQHFLQQGMFERSSFDEACQALNNIFPYNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-77 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 7e-86 46
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-86 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-86 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-85 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-86 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-86 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 7e-86 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-79 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-67 46
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 8e-70 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-70 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-70 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-70 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-70 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 7e-74 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-74 45
escN AAC38383.1 EscN Virulence LEE Protein 5e-74 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-74 45
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-72 45
escN AAC31513.1 L0034 Virulence LEE Protein 2e-74 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-74 45
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-73 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-73 45
escN AAK26715.1 EscN Virulence LEE Protein 9e-74 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 7e-74 45
escN AAL57542.1 EscN Virulence LEE Protein 9e-74 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 7e-74 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-72 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-72 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 8e-68 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-70 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-70 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-70 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 6e-71 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 5e-70 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-70 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-74 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 9e-66 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 9e-66 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG2331 Protein 0.0 86
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG2499 Protein 8e-148 69
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG1254 Protein 7e-126 62
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG2144 Protein 3e-86 46
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG0192 Protein 7e-85 46
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG0390 Protein 5e-77 46
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-80 45
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-70 45
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG0812 Protein 1e-74 45
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG0730 Protein 3e-74 45
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG2459 Protein 2e-64 41
Dd586_1535 YP_003333108.1 flagellar protein export ATPase FliI VFG1008 Protein 1e-62 41