Gene Information

Name : Dd586_1459 (Dd586_1459)
Accession : YP_003333032.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Resistance
Product : CagE, TrbE, VirB component of type IV transporter system
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 1656157 - 1658904 bp
Length : 2748 bp
Strand : -
Note : PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; type IV secretory pathway VirB3 family protein; KEGG: dze:Dd1591_1487 CagE TrbE VirB component of type IV transporter system

DNA sequence :
ATGACCACCCTGAATAAAGCGCTCACCCGGCCCGCCGCCATTATGGGTATCCCCCTTGTCCCGTTCGTTCTCGTCAGCGG
GGCCATCGTCCTGCTGTCGGTTTACACCCGCTATTACCTTGCACTGCTGCTGATCCCGGCCTGGCTGGAAATGCGGGCGA
AGGCCAGAGCCGATATCCATTATTTCGGGCTGTTGTGGCTGGCGTTTAAAACCCGTGGCCGGTTTGCCACCAATCGCCAT
TTCGGGGCGACGGCGATGCTGGCAAGCCGGTATGACGCCGTCGATATTTCGGAGTTTACCGACAAGATGAAATTAAACGC
GCGCATCACGCTGGATAAATACATCCCTTACTCTTCCCACCTTCACCCGCACGTCATCAGAAACCGCCACGGTGATTTCG
TCGCCTCCTGGGAGCTGGGCGGCACCGTGTTTGAATCTGAGGATGAACATCACCTGACGCTGATGACAAGCCATCTCAAC
AACCTGATCCGCGCCTATGAAGGGCTGCCGGTCACGTTCTATATTCACCGCATCCGGGAGACCTATCAGGATGCCTTCGA
GGCAACCTCGGGCATTCCGTTTTCAGACGAGGTCGCAACGCGCTATTACCGGGCACTCAACGCGAAGCCGCTCTGGCGGC
ATCGGCTGTTTTTCACCGTCTGTTATGCGCCCTTCTCCGCGCTGGAGAAAAAGGCCATGAAGACACAGCCCGCCGGAAAA
AGGCAGGCGGCGCTGGATCAGGCGCTGAAGATCATGCTGGAGCACCATGCCGCACTCGGCAGCGCGCTGTCACGCTATAT
GGCGACCCCTCTGGGAACCTATGAGGAGAAAGGACGGGTCTACTCCTCGCAACTGGCGTTCTACCATCGCCTGATCACCG
GCCAATGGCAGCCGGTGGCGGTGACACGCTCACCGTTTTACCTCACGCTCAGTACACCGGATGTGTTTTTTACCACCGAT
ACCGCCGAATGCCAGACCGTCGGCGGCTCCCGTTTCTTTCGCAGTCTGGAAATCAAGGACTATTCACCGGAGACCGCGGC
CGGCCTGCTGGATGCGCTGTTGTATGCCGAAAGCGAGTACGTACTGACGCAGTCTTTCACCTGCATGGCGCGGGATGAAG
CACAACACCATATCCGGCTGGCGGAAAAACGGCTGAACGCGACCGACGATGACGCCCTGTCACAGCGTGAAGAGCTGGTT
GTCTTGCGCGATCTGCTCCAGTCCGGGCATGTGTCCTGCGGCAAATACCATTTTTCCCTGCTGGTGTCGTCGGCCAGTGC
CGAGCAGGTGGTCAGGGAGACCCACGCGCTGGCCCAGCCGTTTACCGACCTCGGTATCATGACCTCGCTGTCCACGCTGT
CGTTACCTGCGGCCTATCTGGCTCAACTGCCCGGCATGTACACCTTTCGCCCCCGGCTGGTGGTCGTCAGCAGCCAGAAT
TACGCGGATCTGGGCAGCCTGCATAACTTTCACCCTCACAAACGCAGCGGCAACCCGTGGGGTGACGCCATCGCCATTCT
GACATCGCCCGGCGGCGGCGGTTATTACCTGAACCTGCACGACAGCCAGGTCGGGCGGGATGATTTTAACGAGAAAACAC
CGGGGAATACCGCCATCATCGGCAAAACCGGCTCAGGGAAGACCCTGCTGATGACGATGATGCAACACCTGATGCAGAAG
TACCGCCACCCGGCGACATTTTCCGCCGCTACCCCCGGTAAACGGCTGACCACCGTTTACTTTGATAAAGACCGGGCCGC
CGAGATGTCGATCCGCCAGATGGGCGGGCGTTACTTCCGCATCCGCACCGGTACGCCTGCCGGGTTCAATCCGTTTTCAC
TTGCGCCAACCCGACGCAACATCAGCTTTATCAAGCAATTGGTCCGCATGTTGTGCCGTCGCAACGGCAAACCGCTCGAC
CCACGCGATGAAGCGCGCATCAGCGCCGCCGTGGATACCCTGATGCAGGACTACCCGCCGGAATTGCGCCGTTATGGCAT
TACCCGGCTGCTGGAGGTGTTGCCCGAGCCGCCGACCCGCGAGGCCAGAACCAACGGGCTGCGCATCCGTCTGAAACAAT
GGGCGCAGGGCGGCGAATTCGGCTGGATTTTCGATAACGCGGAGGACAGCTTTAACATCGGCGAAAGCGATAACATCGGC
ATCGATGGAACGGAATTTCTGGATGACGACGACATCCGCGGCCCGATCACCTTTTACCTGCTGTTCCGCGTCACCAGCCT
GCTGGACGGTCGCCGGTTGGTGATGTTCATGGATGAATTCTGGAAATGGCTGGCGGATGTCGAGTTTTCCAAATTCTCCC
TCAATATGCTCAAGGTGATCCGCAAACTGAACGGCATTTTTATCCCCGCCACCCAGTCCCCCGATGAAATTGTCAGGCAC
CCCATCGCGCCCGCGATTATTGAACAGTGCAGCACGCAGATCTTTCTCGCCAATCCCAAAGCCAGCCGGGCGGATTACGT
GGAGAAAGTGAACGTCCCCGACAGCGTGTATGACACCGTCCGTCGTCTGGACCCGGGCGAGCATTATATGGTCATCGTGA
AAACACCGCTGCGCGCCGGTGAAACCCGGCCTTTTGTCGCCCTGGCAAGAATGGATTTATCGGGCCTCGGCAACCTCACC
ACACTTCTGAGCGGAAGCGAAGACAACCTGAAACGGTTTGATGCGCTTTATCAGGAAGGCATGTCCCCTCACGACTGGAA
AGCGGCCTTCCTCGAACAGGCCATCTGA

Protein sequence :
MTTLNKALTRPAAIMGIPLVPFVLVSGAIVLLSVYTRYYLALLLIPAWLEMRAKARADIHYFGLLWLAFKTRGRFATNRH
FGATAMLASRYDAVDISEFTDKMKLNARITLDKYIPYSSHLHPHVIRNRHGDFVASWELGGTVFESEDEHHLTLMTSHLN
NLIRAYEGLPVTFYIHRIRETYQDAFEATSGIPFSDEVATRYYRALNAKPLWRHRLFFTVCYAPFSALEKKAMKTQPAGK
RQAALDQALKIMLEHHAALGSALSRYMATPLGTYEEKGRVYSSQLAFYHRLITGQWQPVAVTRSPFYLTLSTPDVFFTTD
TAECQTVGGSRFFRSLEIKDYSPETAAGLLDALLYAESEYVLTQSFTCMARDEAQHHIRLAEKRLNATDDDALSQREELV
VLRDLLQSGHVSCGKYHFSLLVSSASAEQVVRETHALAQPFTDLGIMTSLSTLSLPAAYLAQLPGMYTFRPRLVVVSSQN
YADLGSLHNFHPHKRSGNPWGDAIAILTSPGGGGYYLNLHDSQVGRDDFNEKTPGNTAIIGKTGSGKTLLMTMMQHLMQK
YRHPATFSAATPGKRLTTVYFDKDRAAEMSIRQMGGRYFRIRTGTPAGFNPFSLAPTRRNISFIKQLVRMLCRRNGKPLD
PRDEARISAAVDTLMQDYPPELRRYGITRLLEVLPEPPTREARTNGLRIRLKQWAQGGEFGWIFDNAEDSFNIGESDNIG
IDGTEFLDDDDIRGPITFYLLFRVTSLLDGRRLVMFMDEFWKWLADVEFSKFSLNMLKVIRKLNGIFIPATQSPDEIVRH
PIAPAIIEQCSTQIFLANPKASRADYVEKVNVPDSVYDTVRRLDPGEHYMVIVKTPLRAGETRPFVALARMDLSGLGNLT
TLLSGSEDNLKRFDALYQEGMSPHDWKAAFLEQAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70302.1 Pilx3-4/VirB3-4-like protein Not tested HPI Protein 0.0 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_1459 YP_003333032.1 CagE, TrbE, VirB component of type IV transporter system BAC0398 Protein 0.0 54