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Name : Dd586_1303 (Dd586_1303) Accession : YP_003332890.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Unknown Product : type VI secretion protein IcmF Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 1453794 - 1457291 bp Length : 3498 bp Strand : + Note : TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: dze:Dd1591_2794 type VI secretion protein IcmF DNA sequence : ATGTTGAAAATAATCATTACCTTTCTGCGGCAACAGCTGCCGAAACTGAAACCGTCCTGGCTGCTGTTGGGGGTGGTGGT ATGGGTAGTTGCGTTGGTGCTGGCTTGGTGGCTGGGGCCGCGTCTGCTGCTTGGCGAGATGCGCCCACTGCAAAGCGTGT GGGGTCGCGTGGTGTTCACGCTGGTCTGGCTGTGGCTGGGGTTTGCCTACAGTGCCTGGCGTGTCTGGCGTCGGGTACAG CAACTGCGTGCGGAACGCCGTGAACAGCAGACTATCGAGCAAGACCCCTTGCAGGTATACGTTGATAGCCAGCAAACCTT TCTGGACCGTTGGCTACAGGCGTTTCAAACCCAGCTCGGCAAAAAGGCGTTGTACGCCATGCCCTGGTATCTGGCGATTG GTTTGTCCGGCAGCGGTAAAAGCAGCCTGATCCATCGTGCTAACCCGGCCAATAAGCTCAACCCGAAGCTGGATGCGGAG TTGCGTGAAGTCGCTGGCGGCCAGCAGGTGAACAGTTGGGTTGGTGAGTCAGCGGTTATCTGGGATCCGAGCGGTCACTT GCTGGCGCAACCGGAGATCGGCGCAGAGCCGTCGGCCGGGCGTCACGCGCGTCTGTGGCAGCATCTGCTGCAATGGCTGA GCCTCAACCGTCGTCGCCAGCCGCTCAACGGGCTGGTGCTGACTATCGACCTCTCCTGGTTGTCGCAGGCCAGCGTGTCG GAGCGCAAGGCCTATGCGCAGGTGATGCGCGCCCGCCTGCAGGAGATTGCGGTCAACATCAATACCCGTTTGCCGTTGTA TGTGGCGCTGACCCGTCTGGACATGCTGCGCGGTTTTGACGTGGTGTACCGTTCGCTGAACCGGGAGGCACGTCAGGCGG TGTTGGGGGTGACGTTTACGCCACAGGCCAGCCACGGCAAAGGCTGGCTGGAAGAGCTGGAGCGCTTCTGGGATGAGTGG ATCACCAGCCTTAACAATAACCTGCCGGAAATGCTGCTGACGCAGTCGGACAGCGGTGTACGCAATACGCTGTTTACCTT CGTGCGTCAGTTGGCCGGGCTTAAGGATTATGTGACGGAAGTGTTGAACGAAACACTGGCGACCGGCGACGACCGTGCAT TTTTGGTACGCGGCGTTTACGCCAGTTCGGTGTATCAGCAGGGGGTGCCGTTTGACGCCTTCGCTCAGTCGGCTTCGCGC CGTTACCAATTGCCGGAGCCGATTAATGCGGCGATGCGCGGCGAATCTAATACCTTCTTCGTACAGAAACTGTTCCCAGA GGTGATTTTCCCGGAGGCCAGTCTGGCAGGGGAAAACCGGCTGCACAGCCTCTATCGCCGTCGCCGCATGAGCATTGGGG TGACCTGCATGGTGCTGTTTGGGCTGGCGATGATCGGTAGCTGGCACCATTTCTACCGGGTCAACGAAGAGGCCGGTCGT AACGTGCTGACCAAAGCGCAGGCGTTCATCGGCACCAACGAGCTGGAAGGGCAGGCGGGATACGGCTACCAGCAGTTGCC GCGTTTGAATTTGATCCGCGACGCTACTCTGTCGTTCGGTAACTACCATGAACGTACGCCGATGCTGGCGGATCTTGGCC TGTATCAGGGCGATAAGATTGGCCCCTACGTGGAAGGTTCGTACCTGCAAATGCTTAACCAGCGCTTCTTGCCTGCGGTG ATGCAAGGGCTGCTGGAAGACCTGAATCAGGCTCCGGCGGGTAGTGAACAAAAGCTCACTATTTTGCGGGTAATGCGGAT GCTGGACGACGCCTCCGGGCGTAACAAGACGCTGGTGGAGCAGTTTATGGCGCTGCGCTGGCAGAAGGCGTTCCCCGGTC AGGGCAAGGTGCAGGAACAACTGATGCAGCATCTGGATTACGCGCTGGATCATACCGACTGGCATCAGTCCCGCGAGCAA AAGGATACGGTGGCGATCTCGACGTTTGCACCGTTTGTCGACCCGATCGCCAGTGCCCAGCGCGAGCTGAGCAAGCTGCC GATGTACCAGCGTGTCTACCAGAGTCTGGTGATGAAAGCGACGCAGGTGCTGCCGCCGGATCTGGCGCTCCGCGACGAGG TCGGGCCGACGTTTGACTCGGTATTTAGTTTGCGTAATGACAAGGCAGGCACCGTACCCCGCTTGTTGACCTATCCCGGT TTCAGCGATTTTTACCTCAAGCAGGATAAGACACTGCTGGACCTGACCGCGCTGGATGCCTGGGTATTGGGGCAGCGTGA GCGTGCTCACCTGAGCGAGGCAGACCGTAAGGAAATTCTGCGGCAGGTGAATGACCGCTATATCACCGACTACATCAACC AGTGGCAAAAAGCGCTGGCGAATATCGATGTGCAGCCGTTGGAAAGCCCGGAGCAGGCGCTGAACATACTGACCGACATT ACCGGTAATGATCAGCCGTTCCAGCGGGTGCTGACCACGGTGAGTGACAACACCCGTATCCGCAAGCTGGCGGATGACGA GAACGACACCGCGCAAGGCATCAATACCCGTATTGGTCGTCCGTTCATGACGATTAACGCCGCGTTGAGCGGGCGGGGTG AACAGGGGCCGCTGGTGCAGGAGGTCAATCAGAAGCTGACCGATCTCTACCACTATCTCGATCAGATTGTGAATGCGACG GATCCGGGGCAGGCAGCACTGAAAGCGGTGCAGGCGCGTCAGGGCAACAAGTTCGCTGACCCGGTGTTCGCGTTGCAGCA GTATGCTCGCAGCCTGCCGTCGCCGCTCGATCGCTGGGTCGGTCAACTGGCGGGAGAAAGCGCCAGTCTGGTGACCGGTC TTGCCATGTCGTCACTGAATCAGGAATGGCTGGACAAGGTGGTGACGCCGTTTAATGAAAAACTGGCGGATCGCTACCCG TTCAACCCATCCTCTGACAAGGATGTTCCGCTCTCCGAGATGGAACGCTTCTTCGCGGCTGGTGGCACGCTGGATAACTT CTACCAGACCAACCTCAAATCCATCATGGAAGGCGGGATGCTGGAAGGGGAAGGTGCGTCGGTAATGCAAACCGATCTGG TGAAACAGCTTGATCGCGCGACCCGTATCCGCCAGACGCTGTTTAACGCACAAGGCAGCCTGGAAATCCACTTTGTGGTG GAACCGGTGGAACTGACCGCTAACAAGCGTCGCAGTGTTCTGAACCTTGACGGACAGTTGCTGGAATACAGCCACGGACG CCGCACCAAAACGCCGCTGGTGTGGCCGAACAGCATGCGTGACGGCGCTGAAAGCAAGCTGACGCTGGTGCCGGATGACC GCGAGCGCTCGCCACGTAGCCTGAGCTTCACCGGACCGTGGGCCATGTTCCGCCTGTTGACCAACGGCCAGCTAACCCAG GTCAACGACAATACGTTCGACGTGCGCTTCTCACTGGAACAAGGTGGCATGACCTATCGGGTGTATACCGATGCCAGCCA TAACCCGTTTGCCGGTGGCCTGTTTAGCCAGTTCAAGCTGCCTGATTCTCTCTATTAA Protein sequence : MLKIIITFLRQQLPKLKPSWLLLGVVVWVVALVLAWWLGPRLLLGEMRPLQSVWGRVVFTLVWLWLGFAYSAWRVWRRVQ QLRAERREQQTIEQDPLQVYVDSQQTFLDRWLQAFQTQLGKKALYAMPWYLAIGLSGSGKSSLIHRANPANKLNPKLDAE LREVAGGQQVNSWVGESAVIWDPSGHLLAQPEIGAEPSAGRHARLWQHLLQWLSLNRRRQPLNGLVLTIDLSWLSQASVS ERKAYAQVMRARLQEIAVNINTRLPLYVALTRLDMLRGFDVVYRSLNREARQAVLGVTFTPQASHGKGWLEELERFWDEW ITSLNNNLPEMLLTQSDSGVRNTLFTFVRQLAGLKDYVTEVLNETLATGDDRAFLVRGVYASSVYQQGVPFDAFAQSASR RYQLPEPINAAMRGESNTFFVQKLFPEVIFPEASLAGENRLHSLYRRRRMSIGVTCMVLFGLAMIGSWHHFYRVNEEAGR NVLTKAQAFIGTNELEGQAGYGYQQLPRLNLIRDATLSFGNYHERTPMLADLGLYQGDKIGPYVEGSYLQMLNQRFLPAV MQGLLEDLNQAPAGSEQKLTILRVMRMLDDASGRNKTLVEQFMALRWQKAFPGQGKVQEQLMQHLDYALDHTDWHQSREQ KDTVAISTFAPFVDPIASAQRELSKLPMYQRVYQSLVMKATQVLPPDLALRDEVGPTFDSVFSLRNDKAGTVPRLLTYPG FSDFYLKQDKTLLDLTALDAWVLGQRERAHLSEADRKEILRQVNDRYITDYINQWQKALANIDVQPLESPEQALNILTDI TGNDQPFQRVLTTVSDNTRIRKLADDENDTAQGINTRIGRPFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNAT DPGQAALKAVQARQGNKFADPVFALQQYARSLPSPLDRWVGQLAGESASLVTGLAMSSLNQEWLDKVVTPFNEKLADRYP FNPSSDKDVPLSEMERFFAAGGTLDNFYQTNLKSIMEGGMLEGEGASVMQTDLVKQLDRATRIRQTLFNAQGSLEIHFVV EPVELTANKRRSVLNLDGQLLEYSHGRRTKTPLVWPNSMRDGAESKLTLVPDDRERSPRSLSFTGPWAMFRLLTNGQLTQ VNDNTFDVRFSLEQGGMTYRVYTDASHNPFAGGLFSQFKLPDSLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 45 |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 45 |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 45 |
