Gene Information

Name : Dd586_1294 (Dd586_1294)
Accession : YP_003332881.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : type VI secretion protein, VC_A0111 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 1442701 - 1443714 bp
Length : 1014 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: dze:Dd1591_2803 type VI secretion protein, VC_A0111 family

DNA sequence :
ATGGCCGGTGCAGATAGGTCAGCACTCGATGATGTGACCGCAGGGCAGGCGATGTTTCGCCAGGATGCGCGCCACTTCAA
CTTTTTCCAACTGGTGGAGTTACTCAACCAGATGGAAGGCGTCGATCTGGAGCAGGCGCTCGACTTCCGGCCAGAACTGG
AGCGCATTCGCTTTCGCTCCACCGCCTCGATTGGCTTTCACCCCAGTGATGTTCTGCGGGTAGGGGAAGATACCGACGGC
AGGCAGGAGCTGGAAGTGGCGTTCCTCGGGCTGCACGGCAGCCAGTCGCCGATGCCGGGGTACTACCTTGAAGAGCTGGC
GTGGGAATACGCCCAGGGCGAGCAGAAACTGGGGGTGTTCCTCGATTTCTTTCATCACCGCTTGCTGACGCTATTGCACC
GTGCCTGGCGTAAGTACCGCTATCACGTGCGTTTCCAGAATGATGGCGAGGATGGCTTCTCCCGGCTGATGTTCGCGCTG
GTGGGGCTGGGTAACGACGCGGTGCGCGACAGTCTGCCGGTCAACCGCGCCAAGATGCTGTCTTACGCCGGTCTGCTGGC
CAGCCCCAGCCGCTCGCCGGAAGTGGTGGCTGGTCTGGTGATCCACTGCTTTGACCTGGAAGACGTCGAAGTCATCGCCT
GGCAACACCGCAAAGTACCGATTTTTGAAGACCAGCAAAACCGCCTTGGGCGCGCGAATAGCCTGCTGGGTGGGGATTTT
GTCATCGGCGACAAAGTAAACGACTGTGCCGGTAAATTCCTGCTCAAGGTGGATAACCTCAGCTTTAGCCGTTTTCTCAG
TTTCCTGCCCAACGGCGAACATTTTCAGCCGCTGGTGCGTTTTGTTTCCTTCATTTTGCGTGATCAACTGGCCTGGGACT
TACGCCTCGGTTTCGCCGAAGGGGAGGCCAGAGGGCTAAGACTGGGCGATGACCAGAGCAGCCGTCTGGGATGGAGCAGC
TTTCTCGGGCAGCCGCCCGCCGACCCGTATGTGACGATTTGTGTGCAGGAGTAA

Protein sequence :
MAGADRSALDDVTAGQAMFRQDARHFNFFQLVELLNQMEGVDLEQALDFRPELERIRFRSTASIGFHPSDVLRVGEDTDG
RQELEVAFLGLHGSQSPMPGYYLEELAWEYAQGEQKLGVFLDFFHHRLLTLLHRAWRKYRYHVRFQNDGEDGFSRLMFAL
VGLGNDAVRDSLPVNRAKMLSYAGLLASPSRSPEVVAGLVIHCFDLEDVEVIAWQHRKVPIFEDQQNRLGRANSLLGGDF
VIGDKVNDCAGKFLLKVDNLSFSRFLSFLPNGEHFQPLVRFVSFILRDQLAWDLRLGFAEGEARGLRLGDDQSSRLGWSS
FLGQPPADPYVTICVQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-68 48
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 3e-68 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_1294 YP_003332881.1 type VI secretion protein, VC_A0111 family VFG2079 Protein 1e-59 46