Gene Information

Name : Dd586_1291 (Dd586_1291)
Accession : YP_003332878.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : type VI secretion protein, EvpB/VC_A0108 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1439052 - 1440530 bp
Length : 1479 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: dze:Dd1591_2806 type VI secretion protein, EvpB/VC_A0108 family

DNA sequence :
ATGTCAATGGTTGAAGAACAGGCCCAGACAAGCGCGGCCGGTGGTTCATCATCGCTGCTTGAAGAGATCATGGCGCAGGC
GCGCATTACCCCGGTGGATGAAGGTTATAACGTCGCCAAACAGGGTATTGCCGCACTGGTGGCAAACATTCTGGATAGCG
GCAACGCAGCCGAGCCGGTGAACAAAGCGCTGGTCGACAGCATGATCGTTGAGCTGGACAAAAAACTCAGCAAACAAATC
GACGTGATTCTGCATGCTCAGGAGCTACAGGAACTGGAATCCTCCTGGCGTTCACTGAAGCTGCTGATTGATCGCACCGA
TTTCCGTGAAAACATCAAAATCCTGCTGCTGCACGCGACCAAAGACGAGCTGCTGGAAGACTTTGAGTTTGCACCGGAAA
TTACCCAATCCGGTTTCTATAAACACGTGTATTCCAGCGGCTACGGCCAGTTCGGTGGCCAGCCGATCGGCGGGGTGATT
GGCGATTATGCGCTGACCCAAAGCTCGCCGGACATCAAGCTGATGCAGTATGTCAGCGCGGTAGGTGCGATGGCGCATGC
TCCGTTTATCTCCTCCGTTGCACCGACTTTCTTCGGTGTAGACAGCTTTACCGACCTGCCGTCGATCAAAGACCTGAAGT
CGGTGTTTGAAGGCCCGACCTATACCAAATGGCGCTCAATGCGTGAGTCGGAAGATGCCCGTTATCTGGGGCTGACAGCG
CCGCGTTTCCTGGCCCGTTTGCCGTATGACCCGGTAGAAAACCCCATCAAAGGGTTTAACTACAAGGAAGACATCAGCGC
CAGTCACGAAAACTATTTGTGGGGCAACACCGCGTATCTGATGGGCACCGCCATTACCGATAGCTTCGCCAAGTACCGCT
GGTGCCCGAACATTATCGGCCCGCAGAGCGGCGGCGCTATTACCGATCTGCCGGTGCATGTGTATGAAGCGATGGGCCAG
TTGCAGGCCAAGATCCCGACCGAGGTGTTGATCACCGACCGTCGTGAATACGAAATGGCCGAAGAAGGTTTCATCACGCT
GACCATGCGCAAAGACAGCGATAACGCGGCGTTTTTCTCTGCCAACTCGGTGCAGAAACCCAAGGTGTTCGCCAATACCA
AAGAAGGTAAAGAGGCGGAAACCAACTACAAACTGGGTACGCAGCTGCCGTACATGTTCATCATCAACCGTCTGGCGCAC
TACATCAAAGTGTTGCAGCGCGAGCAGATCGGTTCCTGGAAAGAGCGTCAGGATCTGGAGCGCGAGCTGAATAACTGGAT
CAAGCAGTACGTTGCTGATCAGGAAAACCCGCCAGCTGATGTCCGCAGCCGTCGTCCGCTGCGTGCGGCACAAATCAAAG
TGCTGGACGTGGAAGGCGAACCGGGCTGGTACCAGGTGACCATGGCAGTGCGTCCACACTTCAAGTACATGGGGGCGAAC
TTTGAACTGTCCCTGGTTGGTCGTCTGGATAAGGAATAA

Protein sequence :
MSMVEEQAQTSAAGGSSSLLEEIMAQARITPVDEGYNVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQI
DVILHAQELQELESSWRSLKLLIDRTDFRENIKILLLHATKDELLEDFEFAPEITQSGFYKHVYSSGYGQFGGQPIGGVI
GDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDSFTDLPSIKDLKSVFEGPTYTKWRSMRESEDARYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISASHENYLWGNTAYLMGTAITDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQ
LQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFANTKEGKEAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNNWIKQYVADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMAVRPHFKYMGAN
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-170 70
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 4e-170 70
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 5e-146 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_1291 YP_003332878.1 type VI secretion protein, EvpB/VC_A0108 family VFG2093 Protein 0.0 78
Dd586_1291 YP_003332878.1 type VI secretion protein, EvpB/VC_A0108 family VFG2475 Protein 4e-153 61