Gene Information

Name : Dd586_1290 (Dd586_1290)
Accession : YP_003332877.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : type VI secretion protein, VC_A0107 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 1438517 - 1439020 bp
Length : 504 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: dze:Dd1591_2807 type VI secretion protein, VC_A0107 family

DNA sequence :
ATGGCAAAAGGAACTGACGGTGCATCTGTCGCACCAAAGGAACGTATTAATATCAAATATGTCCCGGCCACTGGTGGTCA
GCAGGCGGAAATTGAACTTCCGCTCACGTTGATGGTGGTGGGAAATATGAAAGGACGCACAGAAGAGACGCCGATTGAAG
AACGTCAGACGGTGTCTATCGATAAGAATAATTTCACTTCGGTCATGAAAGAGGCCAACCTGGAGCTGAATTTCAGCGTA
CCTAATCGTCTGGAAGAAGACAGCCAGGATGACCTTCCCGTCAAACTCAGCATTGCTTCGCTGAATGATTTCTCTCCCGA
TCGTATCGCACAGCAAGTGCCGGAACTGCGCAAATTGCTGGAATTGCGAGAAGCACTGGTCGCCTTGAAAGGGCCGCTGG
GTAATATTCCCGCTTTCCGTAATCGCCTGCAGGACCTGTTGTCCAGCGAAGAAGCCAGAGAGCAGCTGCTCAAAGAGCTG
GATCTGGTGAAACCCGCCGAATAA

Protein sequence :
MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMVVGNMKGRTEETPIEERQTVSIDKNNFTSVMKEANLELNFSV
PNRLEEDSQDDLPVKLSIASLNDFSPDRIAQQVPELRKLLELREALVALKGPLGNIPAFRNRLQDLLSSEEAREQLLKEL
DLVKPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-26 54
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-34 52
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 3e-34 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_1290 YP_003332877.1 type VI secretion protein, VC_A0107 family VFG2092 Protein 7e-41 64
Dd586_1290 YP_003332877.1 type VI secretion protein, VC_A0107 family VFG2474 Protein 8e-31 51