Gene Information

Name : Dd586_1272 (Dd586_1272)
Accession : YP_003332861.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : type VI secretion system effector, Hcp1 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 1418778 - 1419296 bp
Length : 519 bp
Strand : +
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: dze:Dd1591_2826 type VI secretion system effector, Hcp1 family

DNA sequence :
ATGCCAACTCCATGCTATATCAGCATCGAAGGTAAAACCCAGGGCAACATCACTGCCGGTGCCTTCACCTCCGACTCCGT
CGGCAACATCTACGTGCAGGGTCACGAAGACGAGATGCTGGTGCAGGAATTCAAACACATCGTCACCGTACCGACCGACC
CGCAGTCCGGCCAGCCTGCCGGTCAGCGCGTGCACAAACCGTTCAAGTTCACCGTCGCGCTGAACAAAGCCGTCCCGCTG
CTGTATAACGCGCTGGCCTCCGGCGAAATGCTGCCGACCGTGACCCTGAAGTGGTACCGCACCTCTGTCGAAGGCAAGCA
GGAGCATTTCTTCACCACCAAACTGACCGACGCCACCATCGTCGACATCAACAACCAGATGCCGCACTGCCAGGACCCGT
CCAAGCAGGATTACACCCAGCTGATCGAAGTGTCGCTGGCGTACCGCAAAATCGACTGGGAACACACCGTGGCCGGGACT
TCCGGCTCTGACGACTGGCGCGCGCCGATCGAAGCGTAA

Protein sequence :
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVQGHEDEMLVQEFKHIVTVPTDPQSGQPAGQRVHKPFKFTVALNKAVPL
LYNALASGEMLPTVTLKWYRTSVEGKQEHFFTTKLTDATIVDINNQMPHCQDPSKQDYTQLIEVSLAYRKIDWEHTVAGT
SGSDDWRAPIEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-67 82
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 1e-67 82
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 2e-49 64