Gene Information

Name : Dd586_1253 (Dd586_1253)
Accession : YP_003332842.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1398285 - 1399451 bp
Length : 1167 bp
Strand : +
Note : KEGG: dze:Dd1591_2849 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAAATTGCAATTGCGGGTACCGGTTATGTTGGCTTGTCCAACGCCATGCTGCTGGCGCAGCATAATGAAGTCGTCGC
GGTGGATATCGTCGCCGAAAAAGTGGACATGCTGAACAAAGGCATCTCCCCGATTGTGGATAAGGAAATCGAAGCTTATC
TGCGCAACCCGGCGCTGAATTTTCGCGCCACGCTGGATGCTGAGTCCGCGTATCGGGGGGCGGAGTTCGTAATTATCGCC
ACGCCGACAGATTACGATCCGAAAACCAATTACTTCAACACGCGCTCGGTGGAAGCGGTGATCAGCAAGGTACTGGAAGT
GAACCCAGACGCCGTTATGATCATCAAATCCACCATCCCGGTGGGTTATACCGCACAGGTTCGTGAACAGTTCGGTACCG
AAAATATCATTTTCTCGCCGGAGTTCCTGCGTGAAGGCCGTGCACTGTACGATAACCTGTATCCGTCCCGTATCGTGGTG
GGTGAGCGTTCTGAACGTGCCGAGCGTTTCGCTCGTCTGCTGGTCGATGGGGCCATCAAGACCAATATTCCAGTGCTGTT
TACCGGGTTAACCGAAGCCGAAGCGATCAAATTGTTTGCCAACACTTATCTGGCAATGCGTGTCGCCTATTTCAATGAGC
TTGATACCTATGCCCAGACACTGGGATTGGATAGCAAGCAGATTATCGAAGGCGTTGGCTTGGATCCGCGTATCGGCCAG
CACTACAACAACCCATCGTTTGGTTATGGCGGTTACTGCCTGCCGAAAGACACCAAGCAACTGCTGGCTAACTATGAATC
CGTGCCGAATAACCTGATTCGGGCGATTGTCGATGCCAATACCACCCGTAAGGATTTCATTGCTGATTCAGTGATTCGAC
GTGGTCCAAAAGTGGTGGGGATTTACCGACTGGTGATGAAGACCGGGTCTGATAATTTCCGCGCCTCCGCGATTCAAGGG
GTGATGAAGCGAATCAAGGCCAAAGGTATCGATGTGGTGGTGTATGAGCCTGCGTTGAAAGAGTCGGAGTTCTTCCGTTC
CCGCGTGATTCATGACCTGGAAGAATTCAAACAGATGTCTGATGTCATTCTGTCGAACCGAATGGCACCAGAATTGTCTG
ATGTAATGGAAAAAGTGTATACCCGCGATCTCTTTGGGGCTGATTAG

Protein sequence : 
MKIAIAGTGYVGLSNAMLLAQHNEVVAVDIVAEKVDMLNKGISPIVDKEIEAYLRNPALNFRATLDAESAYRGAEFVIIA
TPTDYDPKTNYFNTRSVEAVISKVLEVNPDAVMIIKSTIPVGYTAQVREQFGTENIIFSPEFLREGRALYDNLYPSRIVV
GERSERAERFARLLVDGAIKTNIPVLFTGLTEAEAIKLFANTYLAMRVAYFNELDTYAQTLGLDSKQIIEGVGLDPRIGQ
HYNNPSFGYGGYCLPKDTKQLLANYESVPNNLIRAIVDANTTRKDFIADSVIRRGPKVVGIYRLVMKTGSDNFRASAIQG
VMKRIKAKGIDVVVYEPALKESEFFRSRVIHDLEEFKQMSDVILSNRMAPELSDVMEKVYTRDLFGAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-94 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_1253 YP_003332842.1 nucleotide sugar dehydrogenase VFG0963 Protein 3e-106 58