Gene Information

Name : Dd586_1010 (Dd586_1010)
Accession : YP_003332600.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1121520 - 1122632 bp
Length : 1113 bp
Strand : +
Note : KEGG: dze:Dd1591_3090 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGGCTACATACTCTGATGAATTCTATATGGCCCGCGCGCTGGAGTTAGCTCGCCGCGGCCGCTTTACTACGGCACCGAA
TCCGAATGTCGGGTGTGTGATCGTCAGAGATGGCGAAATAGTCGGTGAGGGGTACCACCAGAAAGCCGGTGAGCCCCATG
CCGAAGTGCATGCGTTACGTATGGCAGGCGACAAGGCACGTGGCGCTACGGCGTATGTGACGCTGGAACCCTGTAGCCAT
CACGGGCGTACCCCACCTTGTGCCGATGCACTGGTCGCGGCCGGTGTGGCGCGGGTCGTGGCCGCGATGCAAGACCCTAA
CCCGCAGGTGGCCGGGCGCGGTTTGCATCGTTTACAACAGGCGGGTATCGCTGTGCAGCATGGCGTCCTGATGGATCAGG
CGGAAAAAATTAACCGCGGCTTTTTAAAACGCATGCGCACCGGTTTCCCGTATGTACAACTCAAGCTCGGTGCGTCGCTG
GATGGTCGAACGGCGATGGCTTCCGGTGAAAGTCAGTGGATAACCTCGCCGCAGTCTCGTCAGGATGTGCAACGTTTTCG
TGCACAGAGTGCCGCTATCTTAAGTAGCAGCGCCACCGTGCTGGCGGATGACCCGTCGCTGACCGTGCGCTGGTCAGAAT
TGGATGCCGATACCCAGCGCCTTTATCCGCAAAGCGCGGTACGCCAGCCGGTACGCGTCATCGTCGACAGCCAGTCACGG
GTGACGCCGCAGCATCGTCTAGTGAGTCAACCGGGCCAGACCTGGCTGGCGCGAGCGAGTCAGGATGCGCAGTCCTGGCC
GGATGGCGTGGAGCAACTGACCATGCCGTTGCATGGCGGTGGCATTGATCTGGTGGCGCTGATGATGACGCTGGGCAAGC
GTCAGATTAATACGGTCTGGGTGGAGGCGGGCGCTCATCTGGCCGGTGCATTATTGCAGGCTGGGGTGGTGGATGAACTG
ATAGTCTATCTGGCTCCGACATTATTAGGTGATGCGGCCCGGTCGTTGTGCGTATTGCCGGGGTTGGAACAGTTGTCGCA
GGCCCCGATGTTCGAGATGACCGATGTTCGTCAGATAGGACCGGATGTTCGCCTGACACTGAAGCCTCGTTAG

Protein sequence :
MATYSDEFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMAGDKARGATAYVTLEPCSH
HGRTPPCADALVAAGVARVVAAMQDPNPQVAGRGLHRLQQAGIAVQHGVLMDQAEKINRGFLKRMRTGFPYVQLKLGASL
DGRTAMASGESQWITSPQSRQDVQRFRAQSAAILSSSATVLADDPSLTVRWSELDADTQRLYPQSAVRQPVRVIVDSQSR
VTPQHRLVSQPGQTWLARASQDAQSWPDGVEQLTMPLHGGGIDLVALMMTLGKRQINTVWVEAGAHLAGALLQAGVVDEL
IVYLAPTLLGDAARSLCVLPGLEQLSQAPMFEMTDVRQIGPDVRLTLKPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-63 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-63 51